Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS07080 and BPHYT_RS07085 are separated by 231 nucleotides BPHYT_RS07085 and BPHYT_RS07090 are separated by 127 nucleotides BPHYT_RS07090 and BPHYT_RS07095 overlap by 31 nucleotides
BPHYT_RS07080: BPHYT_RS07080 - glutathione S-transferase, at 1,600,331 to 1,601,341
_RS07080
BPHYT_RS07085: BPHYT_RS07085 - LysR family transcriptional regulator, at 1,601,573 to 1,602,496
_RS07085
BPHYT_RS07090: BPHYT_RS07090 - hypothetical protein, at 1,602,624 to 1,602,941
_RS07090
BPHYT_RS07095: BPHYT_RS07095 - LysR family transcriptional regulator, at 1,602,911 to 1,603,837
_RS07095
Position (kb) 1601
1602
1603 Strain fitness (log2 ratio) -1
0
1 at 1600.728 kb on + strand, within BPHYT_RS07080 at 1601.170 kb on - strand, within BPHYT_RS07080 at 1601.301 kb on + strand at 1601.331 kb on - strand at 1601.439 kb on + strand at 1601.508 kb on + strand at 1601.509 kb on - strand at 1602.200 kb on + strand, within BPHYT_RS07085 at 1602.377 kb on + strand at 1602.565 kb on + strand at 1602.565 kb on + strand at 1602.901 kb on + strand, within BPHYT_RS07090 at 1602.913 kb on - strand at 1602.978 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,600,728 + BPHYT_RS07080 0.39 +0.2 1,601,170 - BPHYT_RS07080 0.83 +0.3 1,601,301 + -0.2 1,601,331 - +0.4 1,601,439 + -0.7 1,601,508 + -0.5 1,601,509 - +0.5 1,602,200 + BPHYT_RS07085 0.68 -0.9 1,602,377 + +1.2 1,602,565 + -0.2 1,602,565 + -0.1 1,602,901 + BPHYT_RS07090 0.87 -0.3 1,602,913 - +1.5 1,602,978 + -0.4
Or see this region's nucleotide sequence