Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS20350 and BPHYT_RS20355 are separated by 29 nucleotides BPHYT_RS20355 and BPHYT_RS20360 are separated by 1 nucleotides BPHYT_RS20360 and BPHYT_RS20365 are separated by 25 nucleotides
BPHYT_RS20350: BPHYT_RS20350 - citrate transporter, at 128,270 to 129,574
_RS20350
BPHYT_RS20355: BPHYT_RS20355 - ABC transporter substrate-binding protein, at 129,604 to 130,962
_RS20355
BPHYT_RS20360: BPHYT_RS20360 - beta-lactamase, at 130,964 to 131,278
_RS20360
BPHYT_RS20365: BPHYT_RS20365 - LysR family transcriptional regulator, at 131,304 to 132,221
_RS20365
Position (kb) 129
130
131 Strain fitness (log2 ratio) -2
-1
0
1 at 128.829 kb on + strand, within BPHYT_RS20350 at 128.829 kb on + strand, within BPHYT_RS20350 at 128.953 kb on + strand, within BPHYT_RS20350 at 129.078 kb on - strand at 129.317 kb on + strand, within BPHYT_RS20350 at 129.627 kb on + strand at 129.628 kb on - strand at 129.670 kb on - strand at 130.033 kb on + strand, within BPHYT_RS20355 at 130.033 kb on + strand, within BPHYT_RS20355 at 130.262 kb on - strand, within BPHYT_RS20355 at 130.576 kb on + strand, within BPHYT_RS20355 at 130.842 kb on + strand at 131.012 kb on - strand, within BPHYT_RS20360 at 131.036 kb on + strand at 131.037 kb on - strand, within BPHYT_RS20360 at 131.051 kb on + strand, within BPHYT_RS20360 at 131.285 kb on + strand at 131.285 kb on + strand at 131.288 kb on - strand at 131.404 kb on + strand, within BPHYT_RS20365 at 131.491 kb on + strand, within BPHYT_RS20365
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 128,829 + BPHYT_RS20350 0.43 +0.2 128,829 + BPHYT_RS20350 0.43 +0.3 128,953 + BPHYT_RS20350 0.52 +1.6 129,078 - +0.7 129,317 + BPHYT_RS20350 0.80 +0.4 129,627 + +0.4 129,628 - +0.4 129,670 - +0.5 130,033 + BPHYT_RS20355 0.32 -0.2 130,033 + BPHYT_RS20355 0.32 -1.8 130,262 - BPHYT_RS20355 0.48 +0.3 130,576 + BPHYT_RS20355 0.72 -2.0 130,842 + -0.7 131,012 - BPHYT_RS20360 0.15 +0.3 131,036 + +0.9 131,037 - BPHYT_RS20360 0.23 +0.1 131,051 + BPHYT_RS20360 0.28 -0.1 131,285 + -1.3 131,285 + -0.2 131,288 - +0.4 131,404 + BPHYT_RS20365 0.11 -1.1 131,491 + BPHYT_RS20365 0.20 -0.3
Or see this region's nucleotide sequence