Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS07630 and BPHYT_RS07635 are separated by 316 nucleotides BPHYT_RS07635 and BPHYT_RS07640 are separated by 56 nucleotides BPHYT_RS07640 and BPHYT_RS07645 are separated by 128 nucleotides
BPHYT_RS07630: BPHYT_RS07630 - alkane 1-monooxygenase, at 1,736,936 to 1,737,931
_RS07630
BPHYT_RS07635: BPHYT_RS07635 - alkanesulfonate monooxygenase, at 1,738,248 to 1,739,327
_RS07635
BPHYT_RS07640: BPHYT_RS07640 - hypothetical protein, at 1,739,384 to 1,740,163
_RS07640
BPHYT_RS07645: BPHYT_RS07645 - cysteine dioxygenase, at 1,740,292 to 1,740,900
_RS07645
Position (kb) 1738
1739
1740 Strain fitness (log2 ratio) -1
0
1
2 at 1737.330 kb on + strand, within BPHYT_RS07630 at 1737.352 kb on + strand, within BPHYT_RS07630 at 1737.353 kb on - strand, within BPHYT_RS07630 at 1737.355 kb on - strand, within BPHYT_RS07630 at 1737.554 kb on - strand, within BPHYT_RS07630 at 1737.748 kb on - strand, within BPHYT_RS07630 at 1738.163 kb on - strand at 1738.163 kb on - strand at 1738.163 kb on - strand at 1738.380 kb on - strand, within BPHYT_RS07635 at 1738.555 kb on + strand, within BPHYT_RS07635 at 1738.556 kb on - strand, within BPHYT_RS07635 at 1739.196 kb on + strand, within BPHYT_RS07635 at 1739.196 kb on + strand, within BPHYT_RS07635 at 1739.197 kb on - strand, within BPHYT_RS07635 at 1739.820 kb on - strand, within BPHYT_RS07640 at 1739.979 kb on - strand, within BPHYT_RS07640
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 1,737,330 + BPHYT_RS07630 0.40 -1.1 1,737,352 + BPHYT_RS07630 0.42 -0.1 1,737,353 - BPHYT_RS07630 0.42 +0.3 1,737,355 - BPHYT_RS07630 0.42 +0.3 1,737,554 - BPHYT_RS07630 0.62 +0.1 1,737,748 - BPHYT_RS07630 0.82 -0.1 1,738,163 - +2.0 1,738,163 - +1.4 1,738,163 - -0.3 1,738,380 - BPHYT_RS07635 0.12 +0.4 1,738,555 + BPHYT_RS07635 0.28 -0.3 1,738,556 - BPHYT_RS07635 0.29 +0.2 1,739,196 + BPHYT_RS07635 0.88 -0.9 1,739,196 + BPHYT_RS07635 0.88 -0.9 1,739,197 - BPHYT_RS07635 0.88 -0.3 1,739,820 - BPHYT_RS07640 0.56 +1.7 1,739,979 - BPHYT_RS07640 0.76 -0.2
Or see this region's nucleotide sequence