Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS01670 and BPHYT_RS01675 are separated by 277 nucleotides BPHYT_RS01675 and BPHYT_RS01680 are separated by 180 nucleotides
BPHYT_RS01670: BPHYT_RS01670 - lauroyl acyltransferase, at 378,909 to 379,793
_RS01670
BPHYT_RS01675: BPHYT_RS01675 - S-adenosylmethionine synthase, at 380,071 to 381,261
_RS01675
BPHYT_RS01680: BPHYT_RS01680 - hypothetical protein, at 381,442 to 381,807
_RS01680
Position (kb) 380
381
382 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 379.855 kb on - strand at 379.889 kb on - strand at 379.889 kb on - strand at 379.889 kb on - strand at 379.904 kb on + strand at 379.904 kb on + strand at 379.921 kb on + strand at 379.981 kb on + strand at 381.434 kb on + strand at 381.435 kb on - strand at 381.435 kb on - strand at 381.443 kb on + strand at 381.801 kb on + strand at 381.801 kb on + strand at 381.801 kb on + strand at 381.801 kb on + strand at 381.802 kb on - strand at 381.802 kb on - strand at 381.802 kb on - strand at 381.820 kb on - strand at 381.820 kb on - strand at 381.933 kb on - strand at 381.933 kb on - strand at 381.960 kb on - strand at 382.007 kb on - strand at 382.007 kb on - strand at 382.027 kb on + strand at 382.027 kb on + strand at 382.028 kb on - strand at 382.061 kb on + strand at 382.170 kb on - strand at 382.170 kb on - strand at 382.170 kb on - strand at 382.176 kb on + strand at 382.176 kb on + strand at 382.176 kb on + strand at 382.176 kb on + strand at 382.177 kb on - strand at 382.177 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 379,855 - +0.8 379,889 - +1.9 379,889 - -0.8 379,889 - -0.1 379,904 + +0.1 379,904 + -0.3 379,921 + -0.7 379,981 + +1.0 381,434 + -0.9 381,435 - +1.4 381,435 - +1.0 381,443 + +0.0 381,801 + +2.4 381,801 + -0.5 381,801 + -0.3 381,801 + -0.0 381,802 - +0.9 381,802 - +0.3 381,802 - +0.3 381,820 - +0.1 381,820 - -0.4 381,933 - -2.1 381,933 - -0.6 381,960 - -1.3 382,007 - -1.3 382,007 - -1.9 382,027 + -0.2 382,027 + -0.5 382,028 - +0.2 382,061 + +0.7 382,170 - -0.9 382,170 - +0.0 382,170 - +0.1 382,176 + +1.0 382,176 + +0.2 382,176 + +1.8 382,176 + -0.3 382,177 - -0.1 382,177 - +3.2
Or see this region's nucleotide sequence