Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27265 and BWI76_RS27270 are separated by 3 nucleotides BWI76_RS27270 and BWI76_RS27275 overlap by 1 nucleotides BWI76_RS27275 and BWI76_RS27280 overlap by 23 nucleotides
BWI76_RS27265: BWI76_RS27265 - ADP-heptose--LPS heptosyltransferase II, at 5,658,863 to 5,659,921
_RS27265
BWI76_RS27270: BWI76_RS27270 - ADP-heptose--LPS heptosyl transferase I, at 5,659,925 to 5,660,896
_RS27270
BWI76_RS27275: BWI76_RS27275 - hypothetical protein, at 5,660,896 to 5,661,804
_RS27275
BWI76_RS27280: BWI76_RS27280 - polymerase, at 5,661,782 to 5,662,948
_RS27280
Position (kb) 5660
5661
5662 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5660.898 kb on - strand at 5660.979 kb on + strand at 5661.090 kb on - strand, within BWI76_RS27275 at 5661.167 kb on - strand, within BWI76_RS27275 at 5661.293 kb on - strand, within BWI76_RS27275 at 5661.334 kb on + strand, within BWI76_RS27275 at 5661.444 kb on - strand, within BWI76_RS27275 at 5661.527 kb on - strand, within BWI76_RS27275 at 5661.527 kb on - strand, within BWI76_RS27275 at 5661.527 kb on - strand, within BWI76_RS27275 at 5661.560 kb on - strand, within BWI76_RS27275 at 5661.570 kb on - strand, within BWI76_RS27275 at 5661.619 kb on + strand, within BWI76_RS27275 at 5661.689 kb on + strand, within BWI76_RS27275 at 5661.820 kb on - strand at 5661.936 kb on - strand, within BWI76_RS27280 at 5661.982 kb on + strand, within BWI76_RS27280 at 5662.007 kb on + strand, within BWI76_RS27280 at 5662.014 kb on + strand, within BWI76_RS27280 at 5662.158 kb on - strand, within BWI76_RS27280 at 5662.171 kb on - strand, within BWI76_RS27280 at 5662.191 kb on - strand, within BWI76_RS27280 at 5662.248 kb on - strand, within BWI76_RS27280 at 5662.431 kb on + strand, within BWI76_RS27280 at 5662.439 kb on - strand, within BWI76_RS27280 at 5662.529 kb on - strand, within BWI76_RS27280 at 5662.584 kb on - strand, within BWI76_RS27280 at 5662.646 kb on + strand, within BWI76_RS27280 at 5662.712 kb on + strand, within BWI76_RS27280 at 5662.714 kb on + strand, within BWI76_RS27280
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 5,660,898 - -1.4 5,660,979 + +0.3 5,661,090 - BWI76_RS27275 0.21 -2.0 5,661,167 - BWI76_RS27275 0.30 -2.4 5,661,293 - BWI76_RS27275 0.44 -2.9 5,661,334 + BWI76_RS27275 0.48 -1.2 5,661,444 - BWI76_RS27275 0.60 -1.0 5,661,527 - BWI76_RS27275 0.69 -3.2 5,661,527 - BWI76_RS27275 0.69 -0.1 5,661,527 - BWI76_RS27275 0.69 +0.5 5,661,560 - BWI76_RS27275 0.73 -0.3 5,661,570 - BWI76_RS27275 0.74 -2.5 5,661,619 + BWI76_RS27275 0.80 -2.4 5,661,689 + BWI76_RS27275 0.87 -2.4 5,661,820 - -0.3 5,661,936 - BWI76_RS27280 0.13 -1.3 5,661,982 + BWI76_RS27280 0.17 -1.2 5,662,007 + BWI76_RS27280 0.19 -2.8 5,662,014 + BWI76_RS27280 0.20 -2.2 5,662,158 - BWI76_RS27280 0.32 -2.2 5,662,171 - BWI76_RS27280 0.33 -1.7 5,662,191 - BWI76_RS27280 0.35 -3.2 5,662,248 - BWI76_RS27280 0.40 -1.6 5,662,431 + BWI76_RS27280 0.56 -0.1 5,662,439 - BWI76_RS27280 0.56 -3.7 5,662,529 - BWI76_RS27280 0.64 -1.2 5,662,584 - BWI76_RS27280 0.69 -2.1 5,662,646 + BWI76_RS27280 0.74 -2.1 5,662,712 + BWI76_RS27280 0.80 -1.1 5,662,714 + BWI76_RS27280 0.80 -2.3
Or see this region's nucleotide sequence