Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23075 and BWI76_RS23080 overlap by 4 nucleotides BWI76_RS23080 and BWI76_RS23085 are separated by 10 nucleotides BWI76_RS23085 and BWI76_RS23090 overlap by 4 nucleotides
BWI76_RS23075: BWI76_RS23075 - cobalt-precorrin-5B (C(1))-methyltransferase, at 4,810,516 to 4,811,655
_RS23075
BWI76_RS23080: BWI76_RS23080 - precorrin-8X methylmutase, at 4,811,652 to 4,812,284
_RS23080
BWI76_RS23085: BWI76_RS23085 - adenosylcobinamide-phosphate synthase, at 4,812,295 to 4,813,254
_RS23085
BWI76_RS23090: BWI76_RS23090 - cobyrinic acid a,c-diamide synthase, at 4,813,251 to 4,814,630
_RS23090
Position (kb)
4812
4813
4814 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4811.304 kb on - strand, within BWI76_RS23075 at 4811.461 kb on - strand at 4811.952 kb on - strand, within BWI76_RS23080 at 4812.051 kb on + strand, within BWI76_RS23080 at 4812.082 kb on + strand, within BWI76_RS23080 at 4812.259 kb on + strand at 4812.326 kb on + strand at 4812.334 kb on - strand at 4812.334 kb on - strand at 4812.334 kb on - strand at 4812.358 kb on - strand at 4812.521 kb on + strand, within BWI76_RS23085 at 4812.525 kb on - strand, within BWI76_RS23085 at 4812.581 kb on + strand, within BWI76_RS23085 at 4812.589 kb on - strand, within BWI76_RS23085 at 4812.601 kb on + strand, within BWI76_RS23085 at 4812.616 kb on + strand, within BWI76_RS23085 at 4812.624 kb on - strand, within BWI76_RS23085 at 4812.637 kb on - strand, within BWI76_RS23085 at 4812.712 kb on + strand, within BWI76_RS23085 at 4812.825 kb on - strand, within BWI76_RS23085 at 4812.967 kb on - strand, within BWI76_RS23085 at 4813.365 kb on + strand at 4813.375 kb on - strand at 4813.524 kb on + strand, within BWI76_RS23090 at 4813.595 kb on + strand, within BWI76_RS23090 at 4813.667 kb on - strand, within BWI76_RS23090 at 4813.757 kb on + strand, within BWI76_RS23090 at 4813.827 kb on - strand, within BWI76_RS23090 at 4813.868 kb on + strand, within BWI76_RS23090 at 4814.066 kb on + strand, within BWI76_RS23090 at 4814.087 kb on + strand, within BWI76_RS23090 at 4814.097 kb on - strand, within BWI76_RS23090 at 4814.198 kb on - strand, within BWI76_RS23090 at 4814.210 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 4,811,304 - BWI76_RS23075 0.69 -0.2 4,811,461 - +1.0 4,811,952 - BWI76_RS23080 0.47 -0.3 4,812,051 + BWI76_RS23080 0.63 -0.3 4,812,082 + BWI76_RS23080 0.68 -0.9 4,812,259 + +0.0 4,812,326 + -0.5 4,812,334 - +0.5 4,812,334 - +0.1 4,812,334 - -0.9 4,812,358 - +0.9 4,812,521 + BWI76_RS23085 0.24 -2.3 4,812,525 - BWI76_RS23085 0.24 -0.5 4,812,581 + BWI76_RS23085 0.30 +0.2 4,812,589 - BWI76_RS23085 0.31 -0.1 4,812,601 + BWI76_RS23085 0.32 -2.1 4,812,616 + BWI76_RS23085 0.33 -1.1 4,812,624 - BWI76_RS23085 0.34 +0.2 4,812,637 - BWI76_RS23085 0.36 -0.7 4,812,712 + BWI76_RS23085 0.43 -0.3 4,812,825 - BWI76_RS23085 0.55 -0.3 4,812,967 - BWI76_RS23085 0.70 -1.0 4,813,365 + +3.0 4,813,375 - -0.0 4,813,524 + BWI76_RS23090 0.20 +0.1 4,813,595 + BWI76_RS23090 0.25 +1.7 4,813,667 - BWI76_RS23090 0.30 +0.5 4,813,757 + BWI76_RS23090 0.37 -0.1 4,813,827 - BWI76_RS23090 0.42 +0.3 4,813,868 + BWI76_RS23090 0.45 -0.2 4,814,066 + BWI76_RS23090 0.59 -0.7 4,814,087 + BWI76_RS23090 0.61 -0.2 4,814,097 - BWI76_RS23090 0.61 -0.3 4,814,198 - BWI76_RS23090 0.69 -0.4 4,814,210 + +1.8
Or see this region's nucleotide sequence