Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22705 and BWI76_RS22710 are separated by 237 nucleotides
BWI76_RS22705: BWI76_RS22705 - siroheme synthase, at 4,729,909 to 4,731,324
_RS22705
BWI76_RS22710: BWI76_RS22710 - Zn-dependent exopeptidase M28, at 4,731,562 to 4,732,617
_RS22710
Position (kb)
4731
4732
4733 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4730.565 kb on + strand, within BWI76_RS22705 at 4730.573 kb on - strand, within BWI76_RS22705 at 4730.663 kb on - strand, within BWI76_RS22705 at 4730.663 kb on - strand, within BWI76_RS22705 at 4730.735 kb on + strand, within BWI76_RS22705 at 4730.787 kb on + strand, within BWI76_RS22705 at 4730.832 kb on - strand, within BWI76_RS22705 at 4731.028 kb on - strand, within BWI76_RS22705 at 4731.028 kb on - strand, within BWI76_RS22705 at 4731.252 kb on + strand at 4731.316 kb on + strand at 4731.316 kb on + strand at 4731.324 kb on - strand at 4731.360 kb on + strand at 4731.360 kb on + strand at 4731.368 kb on - strand at 4731.368 kb on - strand at 4731.368 kb on - strand at 4731.368 kb on - strand at 4731.373 kb on + strand at 4731.373 kb on + strand at 4731.460 kb on - strand at 4731.514 kb on + strand at 4731.514 kb on + strand at 4731.545 kb on + strand at 4731.610 kb on + strand at 4731.664 kb on + strand at 4731.672 kb on - strand, within BWI76_RS22710 at 4731.681 kb on - strand, within BWI76_RS22710 at 4731.765 kb on - strand, within BWI76_RS22710 at 4731.791 kb on - strand, within BWI76_RS22710 at 4731.804 kb on + strand, within BWI76_RS22710 at 4731.804 kb on + strand, within BWI76_RS22710 at 4731.813 kb on - strand, within BWI76_RS22710 at 4731.819 kb on - strand, within BWI76_RS22710 at 4731.844 kb on + strand, within BWI76_RS22710 at 4731.912 kb on + strand, within BWI76_RS22710 at 4731.915 kb on + strand, within BWI76_RS22710 at 4731.920 kb on - strand, within BWI76_RS22710 at 4732.432 kb on - strand, within BWI76_RS22710 at 4732.596 kb on + strand at 4732.607 kb on + strand at 4732.677 kb on + strand at 4732.709 kb on + strand at 4732.712 kb on - strand at 4732.813 kb on + strand at 4732.828 kb on + strand at 4732.838 kb on - strand at 4732.867 kb on + strand at 4732.875 kb on - strand at 4732.875 kb on - strand at 4732.918 kb on - strand at 4733.005 kb on - strand at 4733.070 kb on - strand at 4733.257 kb on - strand at 4733.284 kb on + strand at 4733.310 kb on + strand at 4733.318 kb on - strand at 4733.502 kb on - strand at 4733.537 kb on - strand at 4733.553 kb on + strand at 4733.553 kb on + strand at 4733.553 kb on + strand at 4733.561 kb on - strand at 4733.561 kb on - strand at 4733.561 kb on - strand at 4733.561 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 4,730,565 + BWI76_RS22705 0.46 +0.5 4,730,573 - BWI76_RS22705 0.47 +0.1 4,730,663 - BWI76_RS22705 0.53 +0.2 4,730,663 - BWI76_RS22705 0.53 +0.3 4,730,735 + BWI76_RS22705 0.58 +0.3 4,730,787 + BWI76_RS22705 0.62 -1.0 4,730,832 - BWI76_RS22705 0.65 -0.9 4,731,028 - BWI76_RS22705 0.79 -0.4 4,731,028 - BWI76_RS22705 0.79 +0.5 4,731,252 + +0.8 4,731,316 + -0.7 4,731,316 + -0.6 4,731,324 - +0.8 4,731,360 + -0.0 4,731,360 + -0.3 4,731,368 - -0.3 4,731,368 - +0.9 4,731,368 - -0.3 4,731,368 - -1.1 4,731,373 + -0.5 4,731,373 + +0.2 4,731,460 - +0.8 4,731,514 + +0.2 4,731,514 + -1.5 4,731,545 + +0.4 4,731,610 + -1.4 4,731,664 + -1.0 4,731,672 - BWI76_RS22710 0.10 +1.2 4,731,681 - BWI76_RS22710 0.11 -0.1 4,731,765 - BWI76_RS22710 0.19 +1.2 4,731,791 - BWI76_RS22710 0.22 +0.5 4,731,804 + BWI76_RS22710 0.23 -1.5 4,731,804 + BWI76_RS22710 0.23 +0.2 4,731,813 - BWI76_RS22710 0.24 -0.4 4,731,819 - BWI76_RS22710 0.24 -0.3 4,731,844 + BWI76_RS22710 0.27 +1.3 4,731,912 + BWI76_RS22710 0.33 +2.2 4,731,915 + BWI76_RS22710 0.33 +0.4 4,731,920 - BWI76_RS22710 0.34 +0.9 4,732,432 - BWI76_RS22710 0.82 +0.3 4,732,596 + +0.2 4,732,607 + -0.5 4,732,677 + -0.9 4,732,709 + +3.8 4,732,712 - -0.1 4,732,813 + -0.2 4,732,828 + -0.1 4,732,838 - -0.0 4,732,867 + -0.4 4,732,875 - +0.6 4,732,875 - -2.4 4,732,918 - +1.6 4,733,005 - -0.8 4,733,070 - +0.8 4,733,257 - +1.4 4,733,284 + -1.2 4,733,310 + -0.7 4,733,318 - +0.3 4,733,502 - +0.5 4,733,537 - +0.8 4,733,553 + +0.3 4,733,553 + -0.7 4,733,553 + +0.1 4,733,561 - -1.0 4,733,561 - -0.5 4,733,561 - +0.6 4,733,561 - -0.7
Or see this region's nucleotide sequence