Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21385 and BWI76_RS21390 are separated by 203 nucleotides BWI76_RS21390 and BWI76_RS21395 are separated by 69 nucleotides BWI76_RS21395 and BWI76_RS21400 are separated by 35 nucleotides
BWI76_RS21385: BWI76_RS21385 - tRNA/rRNA methyltransferase, at 4,476,385 to 4,477,458
_RS21385
BWI76_RS21390: BWI76_RS21390 - thiol disulfide reductase thioredoxin, at 4,477,662 to 4,478,087
_RS21390
BWI76_RS21395: BWI76_RS21395 - DTW domain-containing protein, at 4,478,157 to 4,478,855
_RS21395
BWI76_RS21400: BWI76_RS21400 - protein lysine acetyltransferase, at 4,478,891 to 4,481,569
_RS21400
Position (kb) 4478
4479 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4477.205 kb on - strand, within BWI76_RS21385 at 4477.231 kb on - strand, within BWI76_RS21385 at 4477.368 kb on + strand at 4477.368 kb on + strand at 4477.376 kb on - strand at 4477.415 kb on + strand at 4477.566 kb on - strand at 4477.655 kb on - strand at 4477.689 kb on + strand at 4477.899 kb on + strand, within BWI76_RS21390 at 4477.936 kb on - strand, within BWI76_RS21390 at 4478.299 kb on - strand, within BWI76_RS21395 at 4478.651 kb on + strand, within BWI76_RS21395 at 4478.789 kb on + strand at 4478.813 kb on + strand at 4478.874 kb on + strand at 4479.064 kb on + strand at 4479.262 kb on + strand, within BWI76_RS21400 at 4479.267 kb on + strand, within BWI76_RS21400 at 4479.275 kb on - strand, within BWI76_RS21400 at 4479.437 kb on + strand, within BWI76_RS21400 at 4479.445 kb on - strand, within BWI76_RS21400 at 4479.520 kb on + strand, within BWI76_RS21400 at 4479.694 kb on + strand, within BWI76_RS21400
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 4,477,205 - BWI76_RS21385 0.76 +0.3 4,477,231 - BWI76_RS21385 0.79 +0.5 4,477,368 + -0.9 4,477,368 + +2.3 4,477,376 - -0.8 4,477,415 + -0.3 4,477,566 - -0.5 4,477,655 - +0.6 4,477,689 + -0.1 4,477,899 + BWI76_RS21390 0.56 -0.6 4,477,936 - BWI76_RS21390 0.64 -2.0 4,478,299 - BWI76_RS21395 0.20 -0.9 4,478,651 + BWI76_RS21395 0.71 -1.5 4,478,789 + -0.0 4,478,813 + +0.0 4,478,874 + -0.0 4,479,064 + +0.5 4,479,262 + BWI76_RS21400 0.14 -0.2 4,479,267 + BWI76_RS21400 0.14 -0.1 4,479,275 - BWI76_RS21400 0.14 +0.5 4,479,437 + BWI76_RS21400 0.20 +0.2 4,479,445 - BWI76_RS21400 0.21 +0.5 4,479,520 + BWI76_RS21400 0.23 +0.2 4,479,694 + BWI76_RS21400 0.30 -0.8
Or see this region's nucleotide sequence