Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14520

Experiment: Parafilmed volatile agar plate with no fungus

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14515 and BWI76_RS14520 overlap by 14 nucleotidesBWI76_RS14520 and BWI76_RS14525 are separated by 165 nucleotides BWI76_RS14515: BWI76_RS14515 - yersiniabactin-iron ABC transporter permease ATP-binding protein YbtQ, at 3,031,119 to 3,032,921 _RS14515 BWI76_RS14520: BWI76_RS14520 - hypothetical protein, at 3,032,908 to 3,034,710 _RS14520 BWI76_RS14525: BWI76_RS14525 - AraC family transcriptional regulator, at 3,034,876 to 3,035,835 _RS14525 Position (kb) 3032 3033 3034 3035Strain fitness (log2 ratio) -1 0 1 2 3 4at 3032.035 kb on + strand, within BWI76_RS14515at 3032.187 kb on + strand, within BWI76_RS14515at 3032.386 kb on + strand, within BWI76_RS14515at 3032.660 kb on + strand, within BWI76_RS14515at 3032.668 kb on - strand, within BWI76_RS14515at 3032.713 kb on + strand, within BWI76_RS14515at 3032.836 kb on + strandat 3032.906 kb on + strandat 3032.938 kb on - strandat 3033.117 kb on - strand, within BWI76_RS14520at 3033.497 kb on - strand, within BWI76_RS14520at 3034.100 kb on + strand, within BWI76_RS14520at 3034.181 kb on - strand, within BWI76_RS14520at 3034.362 kb on + strand, within BWI76_RS14520at 3034.391 kb on - strand, within BWI76_RS14520at 3034.451 kb on + strand, within BWI76_RS14520at 3034.481 kb on - strand, within BWI76_RS14520at 3034.539 kb on - strandat 3034.541 kb on - strandat 3034.832 kb on + strandat 3034.845 kb on - strandat 3034.847 kb on + strandat 3034.996 kb on + strand, within BWI76_RS14525at 3035.061 kb on + strand, within BWI76_RS14525at 3035.205 kb on - strand, within BWI76_RS14525at 3035.230 kb on - strand, within BWI76_RS14525at 3035.456 kb on + strand, within BWI76_RS14525

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Per-strain Table

Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus
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3,032,035 + BWI76_RS14515 0.51 -0.4
3,032,187 + BWI76_RS14515 0.59 +1.2
3,032,386 + BWI76_RS14515 0.70 -0.8
3,032,660 + BWI76_RS14515 0.85 +0.9
3,032,668 - BWI76_RS14515 0.86 -0.3
3,032,713 + BWI76_RS14515 0.88 +0.6
3,032,836 + -0.1
3,032,906 + -0.1
3,032,938 - +4.7
3,033,117 - BWI76_RS14520 0.12 +2.8
3,033,497 - BWI76_RS14520 0.33 +0.2
3,034,100 + BWI76_RS14520 0.66 +0.1
3,034,181 - BWI76_RS14520 0.71 +0.0
3,034,362 + BWI76_RS14520 0.81 -1.0
3,034,391 - BWI76_RS14520 0.82 +4.6
3,034,451 + BWI76_RS14520 0.86 -0.4
3,034,481 - BWI76_RS14520 0.87 -1.6
3,034,539 - -0.2
3,034,541 - +0.5
3,034,832 + -0.2
3,034,845 - +0.1
3,034,847 + +1.9
3,034,996 + BWI76_RS14525 0.12 -0.0
3,035,061 + BWI76_RS14525 0.19 -0.6
3,035,205 - BWI76_RS14525 0.34 -0.3
3,035,230 - BWI76_RS14525 0.37 -0.8
3,035,456 + BWI76_RS14525 0.60 -0.4

Or see this region's nucleotide sequence