Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14515 and BWI76_RS14520 overlap by 14 nucleotides BWI76_RS14520 and BWI76_RS14525 are separated by 165 nucleotides
BWI76_RS14515: BWI76_RS14515 - yersiniabactin-iron ABC transporter permease ATP-binding protein YbtQ, at 3,031,119 to 3,032,921
_RS14515
BWI76_RS14520: BWI76_RS14520 - hypothetical protein, at 3,032,908 to 3,034,710
_RS14520
BWI76_RS14525: BWI76_RS14525 - AraC family transcriptional regulator, at 3,034,876 to 3,035,835
_RS14525
Position (kb)
3032
3033
3034
3035 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 3032.035 kb on + strand, within BWI76_RS14515 at 3032.187 kb on + strand, within BWI76_RS14515 at 3032.386 kb on + strand, within BWI76_RS14515 at 3032.660 kb on + strand, within BWI76_RS14515 at 3032.668 kb on - strand, within BWI76_RS14515 at 3032.713 kb on + strand, within BWI76_RS14515 at 3032.836 kb on + strand at 3032.906 kb on + strand at 3032.938 kb on - strand at 3033.117 kb on - strand, within BWI76_RS14520 at 3033.497 kb on - strand, within BWI76_RS14520 at 3034.100 kb on + strand, within BWI76_RS14520 at 3034.181 kb on - strand, within BWI76_RS14520 at 3034.362 kb on + strand, within BWI76_RS14520 at 3034.391 kb on - strand, within BWI76_RS14520 at 3034.451 kb on + strand, within BWI76_RS14520 at 3034.481 kb on - strand, within BWI76_RS14520 at 3034.539 kb on - strand at 3034.541 kb on - strand at 3034.832 kb on + strand at 3034.845 kb on - strand at 3034.847 kb on + strand at 3034.996 kb on + strand, within BWI76_RS14525 at 3035.061 kb on + strand, within BWI76_RS14525 at 3035.205 kb on - strand, within BWI76_RS14525 at 3035.230 kb on - strand, within BWI76_RS14525 at 3035.456 kb on + strand, within BWI76_RS14525
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 3,032,035 + BWI76_RS14515 0.51 -0.4 3,032,187 + BWI76_RS14515 0.59 +1.2 3,032,386 + BWI76_RS14515 0.70 -0.8 3,032,660 + BWI76_RS14515 0.85 +0.9 3,032,668 - BWI76_RS14515 0.86 -0.3 3,032,713 + BWI76_RS14515 0.88 +0.6 3,032,836 + -0.1 3,032,906 + -0.1 3,032,938 - +4.7 3,033,117 - BWI76_RS14520 0.12 +2.8 3,033,497 - BWI76_RS14520 0.33 +0.2 3,034,100 + BWI76_RS14520 0.66 +0.1 3,034,181 - BWI76_RS14520 0.71 +0.0 3,034,362 + BWI76_RS14520 0.81 -1.0 3,034,391 - BWI76_RS14520 0.82 +4.6 3,034,451 + BWI76_RS14520 0.86 -0.4 3,034,481 - BWI76_RS14520 0.87 -1.6 3,034,539 - -0.2 3,034,541 - +0.5 3,034,832 + -0.2 3,034,845 - +0.1 3,034,847 + +1.9 3,034,996 + BWI76_RS14525 0.12 -0.0 3,035,061 + BWI76_RS14525 0.19 -0.6 3,035,205 - BWI76_RS14525 0.34 -0.3 3,035,230 - BWI76_RS14525 0.37 -0.8 3,035,456 + BWI76_RS14525 0.60 -0.4
Or see this region's nucleotide sequence