Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11545 and BWI76_RS11550 are separated by 24 nucleotides BWI76_RS11550 and BWI76_RS11555 are separated by 4 nucleotides BWI76_RS11555 and BWI76_RS11560 are separated by 9 nucleotides
BWI76_RS11545: BWI76_RS11545 - NAD(P)-dependent alcohol dehydrogenase, at 2,429,132 to 2,430,175
_RS11545
BWI76_RS11550: BWI76_RS11550 - hypothetical protein, at 2,430,200 to 2,431,036
_RS11550
BWI76_RS11555: BWI76_RS11555 - kinase, at 2,431,041 to 2,431,988
_RS11555
BWI76_RS11560: BWI76_RS11560 - oxidoreductase, at 2,431,998 to 2,432,981
_RS11560
Position (kb)
2431
2432 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7 at 2430.101 kb on + strand at 2430.145 kb on + strand at 2430.145 kb on + strand at 2430.169 kb on + strand at 2430.195 kb on - strand at 2430.261 kb on + strand at 2430.262 kb on + strand at 2430.269 kb on - strand at 2430.269 kb on - strand at 2430.293 kb on + strand, within BWI76_RS11550 at 2430.308 kb on + strand, within BWI76_RS11550 at 2430.323 kb on - strand, within BWI76_RS11550 at 2430.453 kb on + strand, within BWI76_RS11550 at 2430.453 kb on + strand, within BWI76_RS11550 at 2430.458 kb on + strand, within BWI76_RS11550 at 2430.480 kb on - strand, within BWI76_RS11550 at 2430.480 kb on - strand, within BWI76_RS11550 at 2430.591 kb on + strand, within BWI76_RS11550 at 2430.591 kb on + strand, within BWI76_RS11550 at 2430.596 kb on + strand, within BWI76_RS11550 at 2430.599 kb on - strand, within BWI76_RS11550 at 2430.737 kb on + strand, within BWI76_RS11550 at 2430.780 kb on - strand, within BWI76_RS11550 at 2430.901 kb on - strand, within BWI76_RS11550 at 2430.920 kb on + strand, within BWI76_RS11550 at 2430.943 kb on + strand, within BWI76_RS11550 at 2430.977 kb on + strand at 2431.009 kb on + strand at 2431.009 kb on + strand at 2431.043 kb on + strand at 2431.051 kb on - strand at 2431.144 kb on + strand, within BWI76_RS11555 at 2431.154 kb on + strand, within BWI76_RS11555 at 2431.156 kb on + strand, within BWI76_RS11555 at 2431.164 kb on - strand, within BWI76_RS11555 at 2431.164 kb on - strand, within BWI76_RS11555 at 2431.164 kb on - strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.223 kb on - strand, within BWI76_RS11555 at 2431.223 kb on - strand, within BWI76_RS11555 at 2431.223 kb on - strand, within BWI76_RS11555 at 2431.223 kb on - strand, within BWI76_RS11555 at 2431.223 kb on - strand, within BWI76_RS11555 at 2431.223 kb on - strand, within BWI76_RS11555 at 2431.223 kb on - strand, within BWI76_RS11555 at 2431.241 kb on - strand, within BWI76_RS11555 at 2431.268 kb on + strand, within BWI76_RS11555 at 2431.270 kb on + strand at 2431.333 kb on + strand, within BWI76_RS11555 at 2431.338 kb on + strand, within BWI76_RS11555 at 2431.338 kb on + strand, within BWI76_RS11555 at 2431.338 kb on + strand, within BWI76_RS11555 at 2431.338 kb on + strand, within BWI76_RS11555 at 2431.346 kb on - strand, within BWI76_RS11555 at 2431.346 kb on - strand, within BWI76_RS11555 at 2431.347 kb on - strand, within BWI76_RS11555 at 2431.392 kb on - strand, within BWI76_RS11555 at 2431.447 kb on - strand, within BWI76_RS11555 at 2431.447 kb on - strand, within BWI76_RS11555 at 2431.488 kb on + strand, within BWI76_RS11555 at 2431.518 kb on + strand, within BWI76_RS11555 at 2431.530 kb on + strand, within BWI76_RS11555 at 2431.538 kb on + strand, within BWI76_RS11555 at 2431.584 kb on - strand, within BWI76_RS11555 at 2431.584 kb on - strand, within BWI76_RS11555 at 2431.591 kb on - strand, within BWI76_RS11555 at 2431.601 kb on + strand, within BWI76_RS11555 at 2431.672 kb on + strand, within BWI76_RS11555 at 2431.763 kb on - strand, within BWI76_RS11555 at 2431.850 kb on + strand, within BWI76_RS11555 at 2431.850 kb on + strand, within BWI76_RS11555 at 2431.858 kb on - strand, within BWI76_RS11555 at 2431.858 kb on - strand, within BWI76_RS11555 at 2431.900 kb on - strand at 2431.983 kb on + strand at 2432.005 kb on - strand at 2432.079 kb on + strand at 2432.156 kb on - strand at 2432.285 kb on + strand, within BWI76_RS11560 at 2432.368 kb on + strand, within BWI76_RS11560 at 2432.535 kb on + strand, within BWI76_RS11560 at 2432.596 kb on + strand, within BWI76_RS11560 at 2432.614 kb on + strand, within BWI76_RS11560 at 2432.659 kb on + strand, within BWI76_RS11560 at 2432.667 kb on - strand, within BWI76_RS11560 at 2432.864 kb on - strand, within BWI76_RS11560 at 2432.974 kb on + strand at 2432.974 kb on - strand at 2432.985 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 2,430,101 + -0.9 2,430,145 + +1.4 2,430,145 + +0.4 2,430,169 + +0.6 2,430,195 - -1.6 2,430,261 + +0.1 2,430,262 + +0.0 2,430,269 - +0.2 2,430,269 - -0.3 2,430,293 + BWI76_RS11550 0.11 +0.5 2,430,308 + BWI76_RS11550 0.13 +0.3 2,430,323 - BWI76_RS11550 0.15 +0.9 2,430,453 + BWI76_RS11550 0.30 +0.6 2,430,453 + BWI76_RS11550 0.30 +1.3 2,430,458 + BWI76_RS11550 0.31 +1.1 2,430,480 - BWI76_RS11550 0.33 +7.5 2,430,480 - BWI76_RS11550 0.33 +0.4 2,430,591 + BWI76_RS11550 0.47 +0.4 2,430,591 + BWI76_RS11550 0.47 +1.0 2,430,596 + BWI76_RS11550 0.47 -0.4 2,430,599 - BWI76_RS11550 0.48 -0.7 2,430,737 + BWI76_RS11550 0.64 +0.2 2,430,780 - BWI76_RS11550 0.69 +1.3 2,430,901 - BWI76_RS11550 0.84 +0.1 2,430,920 + BWI76_RS11550 0.86 +0.0 2,430,943 + BWI76_RS11550 0.89 -1.4 2,430,977 + +0.2 2,431,009 + +2.2 2,431,009 + +1.0 2,431,043 + -0.6 2,431,051 - -0.1 2,431,144 + BWI76_RS11555 0.11 +0.4 2,431,154 + BWI76_RS11555 0.12 +0.8 2,431,156 + BWI76_RS11555 0.12 +0.4 2,431,164 - BWI76_RS11555 0.13 +1.4 2,431,164 - BWI76_RS11555 0.13 -0.4 2,431,164 - BWI76_RS11555 0.13 -0.1 2,431,215 + BWI76_RS11555 0.18 +0.0 2,431,215 + BWI76_RS11555 0.18 +1.5 2,431,215 + BWI76_RS11555 0.18 -1.1 2,431,215 + BWI76_RS11555 0.18 +0.7 2,431,215 + BWI76_RS11555 0.18 +0.2 2,431,215 + BWI76_RS11555 0.18 -0.6 2,431,215 + BWI76_RS11555 0.18 +0.2 2,431,215 + BWI76_RS11555 0.18 +0.5 2,431,215 + BWI76_RS11555 0.18 +0.1 2,431,223 - BWI76_RS11555 0.19 +0.5 2,431,223 - BWI76_RS11555 0.19 +0.8 2,431,223 - BWI76_RS11555 0.19 +0.6 2,431,223 - BWI76_RS11555 0.19 +0.1 2,431,223 - BWI76_RS11555 0.19 -0.4 2,431,223 - BWI76_RS11555 0.19 -0.6 2,431,223 - BWI76_RS11555 0.19 -0.2 2,431,241 - BWI76_RS11555 0.21 -0.6 2,431,268 + BWI76_RS11555 0.24 +1.2 2,431,270 + -0.2 2,431,333 + BWI76_RS11555 0.31 +0.4 2,431,338 + BWI76_RS11555 0.31 +0.2 2,431,338 + BWI76_RS11555 0.31 -1.2 2,431,338 + BWI76_RS11555 0.31 +0.2 2,431,338 + BWI76_RS11555 0.31 +4.3 2,431,346 - BWI76_RS11555 0.32 +0.8 2,431,346 - BWI76_RS11555 0.32 -0.4 2,431,347 - BWI76_RS11555 0.32 +1.9 2,431,392 - BWI76_RS11555 0.37 -0.4 2,431,447 - BWI76_RS11555 0.43 -0.5 2,431,447 - BWI76_RS11555 0.43 +1.6 2,431,488 + BWI76_RS11555 0.47 +0.1 2,431,518 + BWI76_RS11555 0.50 +0.8 2,431,530 + BWI76_RS11555 0.52 -1.0 2,431,538 + BWI76_RS11555 0.52 -0.5 2,431,584 - BWI76_RS11555 0.57 +1.3 2,431,584 - BWI76_RS11555 0.57 -0.1 2,431,591 - BWI76_RS11555 0.58 +0.9 2,431,601 + BWI76_RS11555 0.59 +2.7 2,431,672 + BWI76_RS11555 0.67 -0.6 2,431,763 - BWI76_RS11555 0.76 +0.5 2,431,850 + BWI76_RS11555 0.85 -1.4 2,431,850 + BWI76_RS11555 0.85 -0.2 2,431,858 - BWI76_RS11555 0.86 -0.2 2,431,858 - BWI76_RS11555 0.86 -0.1 2,431,900 - -1.0 2,431,983 + -0.2 2,432,005 - -1.2 2,432,079 + -2.2 2,432,156 - +0.8 2,432,285 + BWI76_RS11560 0.29 -0.9 2,432,368 + BWI76_RS11560 0.38 +0.8 2,432,535 + BWI76_RS11560 0.55 -0.5 2,432,596 + BWI76_RS11560 0.61 -1.8 2,432,614 + BWI76_RS11560 0.63 +1.1 2,432,659 + BWI76_RS11560 0.67 -0.3 2,432,667 - BWI76_RS11560 0.68 -1.4 2,432,864 - BWI76_RS11560 0.88 -0.6 2,432,974 + -0.1 2,432,974 - +0.3 2,432,985 + +0.1
Or see this region's nucleotide sequence