Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08225 and BWI76_RS08230 are separated by 99 nucleotides BWI76_RS08230 and BWI76_RS08235 are separated by 92 nucleotides BWI76_RS08235 and BWI76_RS08240 are separated by 46 nucleotides BWI76_RS08240 and BWI76_RS08245 are separated by 52 nucleotides
BWI76_RS08225: BWI76_RS08225 - glutamine--tRNA ligase, at 1,741,165 to 1,742,832
_RS08225
BWI76_RS08230: BWI76_RS08230 - hypothetical protein, at 1,742,932 to 1,743,176
_RS08230
BWI76_RS08235: BWI76_RS08235 - chitoporin, at 1,743,269 to 1,744,672
_RS08235
BWI76_RS08240: BWI76_RS08240 - hypothetical protein, at 1,744,719 to 1,745,051
_RS08240
BWI76_RS08245: BWI76_RS08245 - MFS transporter, at 1,745,104 to 1,746,399
_RS08245
Position (kb) 1743
1744
1745 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 1743.053 kb on + strand, within BWI76_RS08230 at 1743.061 kb on - strand, within BWI76_RS08230 at 1743.061 kb on - strand, within BWI76_RS08230 at 1743.083 kb on - strand, within BWI76_RS08230 at 1743.225 kb on + strand at 1743.250 kb on + strand at 1743.381 kb on + strand at 1743.540 kb on + strand, within BWI76_RS08235 at 1743.554 kb on - strand, within BWI76_RS08235 at 1743.597 kb on + strand, within BWI76_RS08235 at 1743.609 kb on - strand, within BWI76_RS08235 at 1743.667 kb on + strand, within BWI76_RS08235 at 1743.667 kb on + strand, within BWI76_RS08235 at 1743.675 kb on - strand, within BWI76_RS08235 at 1743.675 kb on - strand, within BWI76_RS08235 at 1743.716 kb on + strand, within BWI76_RS08235 at 1743.782 kb on - strand, within BWI76_RS08235 at 1743.886 kb on + strand, within BWI76_RS08235 at 1744.000 kb on + strand, within BWI76_RS08235 at 1744.000 kb on + strand, within BWI76_RS08235 at 1744.008 kb on - strand, within BWI76_RS08235 at 1744.008 kb on - strand, within BWI76_RS08235 at 1745.045 kb on + strand at 1745.390 kb on - strand, within BWI76_RS08245 at 1745.401 kb on - strand, within BWI76_RS08245 at 1745.440 kb on + strand, within BWI76_RS08245 at 1745.456 kb on + strand, within BWI76_RS08245 at 1745.570 kb on + strand, within BWI76_RS08245
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 1,743,053 + BWI76_RS08230 0.49 -0.6 1,743,061 - BWI76_RS08230 0.53 +0.2 1,743,061 - BWI76_RS08230 0.53 +0.3 1,743,083 - BWI76_RS08230 0.62 +0.2 1,743,225 + -0.6 1,743,250 + -0.8 1,743,381 + -1.6 1,743,540 + BWI76_RS08235 0.19 +1.8 1,743,554 - BWI76_RS08235 0.20 -0.0 1,743,597 + BWI76_RS08235 0.23 -0.1 1,743,609 - BWI76_RS08235 0.24 -0.6 1,743,667 + BWI76_RS08235 0.28 +0.3 1,743,667 + BWI76_RS08235 0.28 -0.6 1,743,675 - BWI76_RS08235 0.29 +0.0 1,743,675 - BWI76_RS08235 0.29 -0.1 1,743,716 + BWI76_RS08235 0.32 -0.6 1,743,782 - BWI76_RS08235 0.37 -1.0 1,743,886 + BWI76_RS08235 0.44 +1.6 1,744,000 + BWI76_RS08235 0.52 -0.4 1,744,000 + BWI76_RS08235 0.52 +0.6 1,744,008 - BWI76_RS08235 0.53 +4.9 1,744,008 - BWI76_RS08235 0.53 -0.3 1,745,045 + -0.6 1,745,390 - BWI76_RS08245 0.22 +0.8 1,745,401 - BWI76_RS08245 0.23 -2.8 1,745,440 + BWI76_RS08245 0.26 -1.6 1,745,456 + BWI76_RS08245 0.27 -0.6 1,745,570 + BWI76_RS08245 0.36 +0.0
Or see this region's nucleotide sequence