Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06270 and BWI76_RS06275 are separated by 123 nucleotides BWI76_RS06275 and BWI76_RS06280 overlap by 4 nucleotides
BWI76_RS06270: BWI76_RS06270 - amidohydrolase, at 1,317,484 to 1,319,352
_RS06270
BWI76_RS06275: BWI76_RS06275 - beta-carotene 15,15'-monooxygenase, at 1,319,476 to 1,322,127
_RS06275
BWI76_RS06280: BWI76_RS06280 - hypothetical protein, at 1,322,124 to 1,323,518
_RS06280
Position (kb)
1319
1320
1321
1322
1323 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1318.828 kb on + strand, within BWI76_RS06270 at 1319.054 kb on + strand, within BWI76_RS06270 at 1319.172 kb on - strand at 1319.323 kb on + strand at 1319.408 kb on + strand at 1319.501 kb on + strand at 1319.640 kb on - strand at 1319.660 kb on - strand at 1319.917 kb on + strand, within BWI76_RS06275 at 1319.942 kb on - strand, within BWI76_RS06275 at 1319.979 kb on + strand, within BWI76_RS06275 at 1319.987 kb on - strand, within BWI76_RS06275 at 1319.992 kb on - strand, within BWI76_RS06275 at 1320.007 kb on - strand, within BWI76_RS06275 at 1320.091 kb on - strand, within BWI76_RS06275 at 1320.176 kb on + strand, within BWI76_RS06275 at 1320.209 kb on + strand, within BWI76_RS06275 at 1320.350 kb on - strand, within BWI76_RS06275 at 1320.775 kb on + strand, within BWI76_RS06275 at 1320.805 kb on - strand, within BWI76_RS06275 at 1320.806 kb on - strand, within BWI76_RS06275 at 1321.082 kb on - strand, within BWI76_RS06275 at 1321.305 kb on + strand, within BWI76_RS06275 at 1321.305 kb on + strand, within BWI76_RS06275 at 1321.532 kb on + strand, within BWI76_RS06275 at 1321.540 kb on - strand, within BWI76_RS06275 at 1321.611 kb on + strand, within BWI76_RS06275 at 1321.813 kb on + strand, within BWI76_RS06275 at 1321.893 kb on + strand at 1321.924 kb on - strand at 1321.959 kb on + strand at 1322.039 kb on + strand at 1322.152 kb on - strand at 1322.475 kb on - strand, within BWI76_RS06280 at 1322.707 kb on + strand, within BWI76_RS06280 at 1322.829 kb on + strand, within BWI76_RS06280 at 1322.888 kb on + strand, within BWI76_RS06280 at 1322.990 kb on - strand, within BWI76_RS06280
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 1,318,828 + BWI76_RS06270 0.72 +0.5 1,319,054 + BWI76_RS06270 0.84 -0.8 1,319,172 - -0.0 1,319,323 + -2.2 1,319,408 + -0.6 1,319,501 + -1.3 1,319,640 - +0.1 1,319,660 - -0.3 1,319,917 + BWI76_RS06275 0.17 -1.1 1,319,942 - BWI76_RS06275 0.18 -0.4 1,319,979 + BWI76_RS06275 0.19 +0.1 1,319,987 - BWI76_RS06275 0.19 +1.1 1,319,992 - BWI76_RS06275 0.19 -1.0 1,320,007 - BWI76_RS06275 0.20 -2.1 1,320,091 - BWI76_RS06275 0.23 +0.5 1,320,176 + BWI76_RS06275 0.26 +0.4 1,320,209 + BWI76_RS06275 0.28 -0.0 1,320,350 - BWI76_RS06275 0.33 +4.6 1,320,775 + BWI76_RS06275 0.49 -1.6 1,320,805 - BWI76_RS06275 0.50 -0.9 1,320,806 - BWI76_RS06275 0.50 -0.2 1,321,082 - BWI76_RS06275 0.61 -0.0 1,321,305 + BWI76_RS06275 0.69 +0.4 1,321,305 + BWI76_RS06275 0.69 +1.9 1,321,532 + BWI76_RS06275 0.78 -0.1 1,321,540 - BWI76_RS06275 0.78 +2.1 1,321,611 + BWI76_RS06275 0.81 +2.1 1,321,813 + BWI76_RS06275 0.88 -0.2 1,321,893 + -1.5 1,321,924 - +0.2 1,321,959 + -0.5 1,322,039 + -0.8 1,322,152 - +0.3 1,322,475 - BWI76_RS06280 0.25 -0.1 1,322,707 + BWI76_RS06280 0.42 -0.3 1,322,829 + BWI76_RS06280 0.51 +0.5 1,322,888 + BWI76_RS06280 0.55 +0.8 1,322,990 - BWI76_RS06280 0.62 -1.9
Or see this region's nucleotide sequence