Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27635 and BWI76_RS27640 are separated by 14 nucleotides BWI76_RS27640 and BWI76_RS27645 are separated by 169 nucleotides BWI76_RS27645 and BWI76_RS27650 overlap by 9 nucleotides BWI76_RS27650 and BWI76_RS27655 are separated by 24 nucleotides
BWI76_RS27635: BWI76_RS27635 - AraC family transcriptional regulator, at 5,734,458 to 5,735,411
_RS27635
BWI76_RS27640: BWI76_RS27640 - hypothetical protein, at 5,735,426 to 5,736,205
_RS27640
BWI76_RS27645: BWI76_RS27645 - ADP-ribose pyrophosphatase, at 5,736,375 to 5,736,929
_RS27645
BWI76_RS27650: BWI76_RS27650 - EamA family transporter, at 5,736,921 to 5,737,781
_RS27650
BWI76_RS27655: BWI76_RS27655 - lipoprotein NlpA, at 5,737,806 to 5,738,615
_RS27655
Position (kb) 5736
5737 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5735.395 kb on + strand at 5735.503 kb on + strand at 5735.533 kb on - strand, within BWI76_RS27640 at 5735.674 kb on + strand, within BWI76_RS27640 at 5735.830 kb on - strand, within BWI76_RS27640 at 5735.835 kb on - strand, within BWI76_RS27640 at 5735.928 kb on + strand, within BWI76_RS27640 at 5735.955 kb on + strand, within BWI76_RS27640 at 5735.955 kb on + strand, within BWI76_RS27640 at 5736.003 kb on - strand, within BWI76_RS27640 at 5736.180 kb on - strand at 5736.188 kb on - strand at 5736.347 kb on - strand at 5736.361 kb on - strand at 5736.430 kb on + strand at 5736.438 kb on - strand, within BWI76_RS27645 at 5736.585 kb on - strand, within BWI76_RS27645 at 5736.727 kb on + strand, within BWI76_RS27645 at 5736.740 kb on + strand, within BWI76_RS27645 at 5736.762 kb on + strand, within BWI76_RS27645 at 5736.840 kb on - strand, within BWI76_RS27645 at 5736.960 kb on - strand at 5737.103 kb on - strand, within BWI76_RS27650 at 5737.135 kb on - strand, within BWI76_RS27650 at 5737.247 kb on + strand, within BWI76_RS27650 at 5737.255 kb on - strand, within BWI76_RS27650 at 5737.423 kb on - strand, within BWI76_RS27650 at 5737.474 kb on + strand, within BWI76_RS27650 at 5737.555 kb on - strand, within BWI76_RS27650 at 5737.574 kb on - strand, within BWI76_RS27650 at 5737.596 kb on + strand, within BWI76_RS27650 at 5737.752 kb on - strand at 5737.752 kb on - strand at 5737.838 kb on - strand at 5737.879 kb on - strand at 5737.888 kb on - strand, within BWI76_RS27655
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 5,735,395 + +0.6 5,735,503 + -0.7 5,735,533 - BWI76_RS27640 0.14 -2.4 5,735,674 + BWI76_RS27640 0.32 -0.2 5,735,830 - BWI76_RS27640 0.52 -0.4 5,735,835 - BWI76_RS27640 0.52 -1.2 5,735,928 + BWI76_RS27640 0.64 -1.1 5,735,955 + BWI76_RS27640 0.68 +0.6 5,735,955 + BWI76_RS27640 0.68 +0.9 5,736,003 - BWI76_RS27640 0.74 +0.1 5,736,180 - -0.8 5,736,188 - +0.1 5,736,347 - +2.0 5,736,361 - -0.1 5,736,430 + +0.5 5,736,438 - BWI76_RS27645 0.11 -0.5 5,736,585 - BWI76_RS27645 0.38 +0.6 5,736,727 + BWI76_RS27645 0.63 -0.5 5,736,740 + BWI76_RS27645 0.66 +0.6 5,736,762 + BWI76_RS27645 0.70 +1.4 5,736,840 - BWI76_RS27645 0.84 +0.7 5,736,960 - +1.1 5,737,103 - BWI76_RS27650 0.21 -0.4 5,737,135 - BWI76_RS27650 0.25 -2.6 5,737,247 + BWI76_RS27650 0.38 -0.6 5,737,255 - BWI76_RS27650 0.39 -0.1 5,737,423 - BWI76_RS27650 0.58 -1.3 5,737,474 + BWI76_RS27650 0.64 -0.9 5,737,555 - BWI76_RS27650 0.74 -0.2 5,737,574 - BWI76_RS27650 0.76 +0.3 5,737,596 + BWI76_RS27650 0.78 +0.7 5,737,752 - +0.0 5,737,752 - +0.1 5,737,838 - -0.6 5,737,879 - +1.2 5,737,888 - BWI76_RS27655 0.10 -1.1
Or see this region's nucleotide sequence