Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23745

Experiment: Parafilmed volatile agar plate with no fungus

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23740 and BWI76_RS23745 are separated by 392 nucleotidesBWI76_RS23745 and BWI76_RS23750 are separated by 9 nucleotides BWI76_RS23740: BWI76_RS23740 - MFS transporter, at 4,956,714 to 4,958,363 _RS23740 BWI76_RS23745: BWI76_RS23745 - arsenate reductase, at 4,958,756 to 4,959,181 _RS23745 BWI76_RS23750: BWI76_RS23750 - arsenical efflux pump membrane protein ArsB, at 4,959,191 to 4,960,483 _RS23750 Position (kb) 4958 4959 4960Strain fitness (log2 ratio) -2 -1 0 1at 4957.843 kb on - strand, within BWI76_RS23740at 4957.878 kb on + strand, within BWI76_RS23740at 4958.214 kb on + strandat 4958.222 kb on - strandat 4958.281 kb on - strandat 4958.422 kb on + strandat 4958.476 kb on - strandat 4958.481 kb on - strandat 4958.660 kb on + strandat 4958.734 kb on - strandat 4958.854 kb on + strand, within BWI76_RS23745at 4958.888 kb on + strand, within BWI76_RS23745at 4959.042 kb on + strand, within BWI76_RS23745at 4959.240 kb on - strandat 4959.252 kb on - strandat 4959.324 kb on + strand, within BWI76_RS23750at 4959.392 kb on + strand, within BWI76_RS23750at 4959.572 kb on - strand, within BWI76_RS23750at 4959.588 kb on + strand, within BWI76_RS23750at 4959.609 kb on + strand, within BWI76_RS23750at 4959.913 kb on + strandat 4960.078 kb on - strandat 4960.078 kb on - strand, within BWI76_RS23750at 4960.179 kb on - strand, within BWI76_RS23750

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Per-strain Table

Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus
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4,957,843 - BWI76_RS23740 0.68 -0.7
4,957,878 + BWI76_RS23740 0.71 -1.1
4,958,214 + -2.5
4,958,222 - -1.2
4,958,281 - -1.9
4,958,422 + +1.3
4,958,476 - +0.0
4,958,481 - -0.2
4,958,660 + -0.7
4,958,734 - +0.2
4,958,854 + BWI76_RS23745 0.23 -0.3
4,958,888 + BWI76_RS23745 0.31 -1.7
4,959,042 + BWI76_RS23745 0.67 -1.5
4,959,240 - -1.4
4,959,252 - -2.2
4,959,324 + BWI76_RS23750 0.10 -1.8
4,959,392 + BWI76_RS23750 0.16 -1.2
4,959,572 - BWI76_RS23750 0.29 +0.3
4,959,588 + BWI76_RS23750 0.31 -0.4
4,959,609 + BWI76_RS23750 0.32 +0.1
4,959,913 + +0.3
4,960,078 - +0.6
4,960,078 - BWI76_RS23750 0.69 +0.6
4,960,179 - BWI76_RS23750 0.76 -0.1

Or see this region's nucleotide sequence