Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21655 and BWI76_RS21660 are separated by 78 nucleotides BWI76_RS21660 and BWI76_RS21665 are separated by 10 nucleotides BWI76_RS21665 and BWI76_RS21670 overlap by 4 nucleotides BWI76_RS21670 and BWI76_RS21675 are separated by 13 nucleotides BWI76_RS21675 and BWI76_RS21680 are separated by 22 nucleotides
BWI76_RS21655: BWI76_RS21655 - hypothetical protein, at 4,533,282 to 4,534,103
_RS21655
BWI76_RS21660: BWI76_RS21660 - antirestriction protein, at 4,534,182 to 4,534,655
_RS21660
BWI76_RS21665: BWI76_RS21665 - hypothetical protein, at 4,534,666 to 4,534,899
_RS21665
BWI76_RS21670: BWI76_RS21670 - hypothetical protein, at 4,534,896 to 4,535,378
_RS21670
BWI76_RS21675: BWI76_RS21675 - hypothetical protein, at 4,535,392 to 4,535,613
_RS21675
BWI76_RS21680: BWI76_RS21680 - antitoxin of the YeeV-YeeU toxin-antitoxin system, at 4,535,636 to 4,535,995
_RS21680
Position (kb) 4534
4535 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4533.427 kb on + strand, within BWI76_RS21655 at 4533.427 kb on + strand, within BWI76_RS21655 at 4533.427 kb on + strand, within BWI76_RS21655 at 4533.454 kb on - strand, within BWI76_RS21655 at 4533.517 kb on + strand, within BWI76_RS21655 at 4533.523 kb on + strand, within BWI76_RS21655 at 4533.827 kb on + strand, within BWI76_RS21655 at 4533.827 kb on + strand, within BWI76_RS21655 at 4533.835 kb on - strand, within BWI76_RS21655 at 4533.927 kb on - strand, within BWI76_RS21655 at 4533.995 kb on + strand, within BWI76_RS21655 at 4533.995 kb on + strand, within BWI76_RS21655 at 4533.995 kb on + strand, within BWI76_RS21655 at 4534.003 kb on - strand, within BWI76_RS21655 at 4534.003 kb on - strand at 4534.387 kb on - strand, within BWI76_RS21660 at 4534.619 kb on + strand at 4534.882 kb on - strand at 4534.942 kb on + strand at 4534.963 kb on - strand, within BWI76_RS21670 at 4535.460 kb on + strand, within BWI76_RS21675 at 4535.587 kb on + strand, within BWI76_RS21675 at 4535.602 kb on + strand at 4535.605 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 4,533,427 + BWI76_RS21655 0.18 +0.3 4,533,427 + BWI76_RS21655 0.18 +0.0 4,533,427 + BWI76_RS21655 0.18 -0.4 4,533,454 - BWI76_RS21655 0.21 +0.2 4,533,517 + BWI76_RS21655 0.29 -0.9 4,533,523 + BWI76_RS21655 0.29 +0.0 4,533,827 + BWI76_RS21655 0.66 +0.1 4,533,827 + BWI76_RS21655 0.66 -0.2 4,533,835 - BWI76_RS21655 0.67 -1.6 4,533,927 - BWI76_RS21655 0.78 -0.4 4,533,995 + BWI76_RS21655 0.87 -0.3 4,533,995 + BWI76_RS21655 0.87 -0.1 4,533,995 + BWI76_RS21655 0.87 +0.3 4,534,003 - BWI76_RS21655 0.88 -2.8 4,534,003 - -0.4 4,534,387 - BWI76_RS21660 0.43 -2.0 4,534,619 + -0.6 4,534,882 - -0.6 4,534,942 + -0.3 4,534,963 - BWI76_RS21670 0.14 +1.0 4,535,460 + BWI76_RS21675 0.31 +0.6 4,535,587 + BWI76_RS21675 0.88 +0.5 4,535,602 + +0.2 4,535,605 - -0.5
Or see this region's nucleotide sequence