Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09075

Experiment: Parafilmed volatile agar plate with no fungus

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS09070 and BWI76_RS09075 are separated by 4 nucleotidesBWI76_RS09075 and BWI76_RS09080 are separated by 152 nucleotidesBWI76_RS09080 and BWI76_RS09085 overlap by 1 nucleotides BWI76_RS09070: BWI76_RS09070 - formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme, at 1,913,606 to 1,916,038 _RS09070 BWI76_RS09075: BWI76_RS09075 - pyruvate formate lyase-activating protein, at 1,916,043 to 1,916,942 _RS09075 BWI76_RS09080: BWI76_RS09080 - molybdopterin-synthase adenylyltransferase MoeB, at 1,917,095 to 1,917,850 _RS09080 BWI76_RS09085: BWI76_RS09085 - molybdopterin molybdenumtransferase MoeA, at 1,917,850 to 1,919,085 _RS09085 Position (kb) 1916 1917Strain fitness (log2 ratio) -2 -1 0 1 2at 1915.140 kb on - strand, within BWI76_RS09070at 1915.163 kb on - strand, within BWI76_RS09070at 1915.382 kb on - strand, within BWI76_RS09070at 1915.419 kb on + strand, within BWI76_RS09070at 1915.666 kb on + strand, within BWI76_RS09070at 1915.929 kb on + strandat 1915.945 kb on + strandat 1915.950 kb on + strandat 1915.950 kb on + strandat 1915.958 kb on - strandat 1916.068 kb on + strandat 1916.103 kb on - strandat 1916.122 kb on + strandat 1916.137 kb on + strand, within BWI76_RS09075at 1916.137 kb on + strand, within BWI76_RS09075at 1916.137 kb on + strand, within BWI76_RS09075at 1916.137 kb on + strand, within BWI76_RS09075at 1916.137 kb on + strand, within BWI76_RS09075at 1916.137 kb on + strand, within BWI76_RS09075at 1916.145 kb on - strand, within BWI76_RS09075at 1916.145 kb on - strand, within BWI76_RS09075at 1916.145 kb on - strand, within BWI76_RS09075at 1916.209 kb on + strand, within BWI76_RS09075at 1916.218 kb on - strand, within BWI76_RS09075at 1916.337 kb on - strand, within BWI76_RS09075at 1916.713 kb on - strand, within BWI76_RS09075at 1917.117 kb on + strandat 1917.343 kb on - strand, within BWI76_RS09080at 1917.670 kb on + strand, within BWI76_RS09080at 1917.818 kb on - strandat 1917.838 kb on + strandat 1917.865 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus
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1,915,140 - BWI76_RS09070 0.63 -0.1
1,915,163 - BWI76_RS09070 0.64 +0.7
1,915,382 - BWI76_RS09070 0.73 +0.3
1,915,419 + BWI76_RS09070 0.75 -0.0
1,915,666 + BWI76_RS09070 0.85 +0.9
1,915,929 + -0.7
1,915,945 + -1.7
1,915,950 + +0.3
1,915,950 + +0.1
1,915,958 - +0.0
1,916,068 + -0.4
1,916,103 - -0.2
1,916,122 + +0.1
1,916,137 + BWI76_RS09075 0.10 -2.2
1,916,137 + BWI76_RS09075 0.10 -0.2
1,916,137 + BWI76_RS09075 0.10 -0.9
1,916,137 + BWI76_RS09075 0.10 -1.5
1,916,137 + BWI76_RS09075 0.10 +0.3
1,916,137 + BWI76_RS09075 0.10 +0.1
1,916,145 - BWI76_RS09075 0.11 -0.2
1,916,145 - BWI76_RS09075 0.11 -0.3
1,916,145 - BWI76_RS09075 0.11 -1.1
1,916,209 + BWI76_RS09075 0.18 -0.3
1,916,218 - BWI76_RS09075 0.19 -0.0
1,916,337 - BWI76_RS09075 0.33 -0.0
1,916,713 - BWI76_RS09075 0.74 +0.8
1,917,117 + +1.4
1,917,343 - BWI76_RS09080 0.33 +1.2
1,917,670 + BWI76_RS09080 0.76 +1.8
1,917,818 - +0.7
1,917,838 + +2.4
1,917,865 - -0.5

Or see this region's nucleotide sequence