Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08065

Experiment: Parafilmed volatile agar plate with no fungus

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS08055 and BWI76_RS08060 are separated by 46 nucleotidesBWI76_RS08060 and BWI76_RS08065 overlap by 8 nucleotidesBWI76_RS08065 and BWI76_RS08070 overlap by 1 nucleotidesBWI76_RS08070 and BWI76_RS08075 are separated by 14 nucleotides BWI76_RS08055: BWI76_RS08055 - alpha-ribazole phosphatase, at 1,706,076 to 1,706,705 _RS08055 BWI76_RS08060: BWI76_RS08060 - nicotinic acid mononucleotide adenylyltransferase, at 1,706,752 to 1,707,402 _RS08060 BWI76_RS08065: BWI76_RS08065 - DNA polymerase III subunit delta, at 1,707,395 to 1,708,426 _RS08065 BWI76_RS08070: BWI76_RS08070 - LPS assembly lipoprotein LptE, at 1,708,426 to 1,709,016 _RS08070 BWI76_RS08075: BWI76_RS08075 - leucine--tRNA ligase, at 1,709,031 to 1,711,637 _RS08075 Position (kb) 1707 1708 1709Strain fitness (log2 ratio) -1 0 1at 1706.727 kb on + strandat 1706.735 kb on - strandat 1706.735 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus
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1,706,727 + -0.5
1,706,735 - -1.6
1,706,735 - +0.6

Or see this region's nucleotide sequence