Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06840

Experiment: Parafilmed volatile agar plate with no fungus

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06835 and BWI76_RS06840 are separated by 176 nucleotidesBWI76_RS06840 and BWI76_RS06845 are separated by 127 nucleotides BWI76_RS06835: BWI76_RS06835 - molecular chaperone HtpG, at 1,433,098 to 1,434,972 _RS06835 BWI76_RS06840: BWI76_RS06840 - adenylate kinase, at 1,435,149 to 1,435,793 _RS06840 BWI76_RS06845: BWI76_RS06845 - ferrochelatase, at 1,435,921 to 1,436,883 _RS06845 Position (kb) 1435 1436Strain fitness (log2 ratio) -1 0 1 2 3 4at 1434.153 kb on + strand, within BWI76_RS06835at 1434.947 kb on + strandat 1434.985 kb on + strandat 1434.985 kb on + strandat 1434.991 kb on - strandat 1434.993 kb on - strandat 1434.993 kb on - strandat 1434.993 kb on - strandat 1435.869 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus
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1,434,153 + BWI76_RS06835 0.56 +2.1
1,434,947 + -0.0
1,434,985 + -0.1
1,434,985 + -0.8
1,434,991 - +4.0
1,434,993 - -0.3
1,434,993 - +1.1
1,434,993 - -0.4
1,435,869 - -0.2

Or see this region's nucleotide sequence