Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05650 and BWI76_RS05655 are separated by 583 nucleotides BWI76_RS05655 and BWI76_RS05660 are separated by 10 nucleotides BWI76_RS05660 and BWI76_RS05665 are separated by 17 nucleotides
BWI76_RS05650: BWI76_RS05650 - mannonate dehydratase, at 1,186,395 to 1,187,579
_RS05650
BWI76_RS05655: BWI76_RS05655 - hypothetical protein, at 1,188,163 to 1,188,420
_RS05655
BWI76_RS05660: BWI76_RS05660 - N-acetyltransferase, at 1,188,431 to 1,188,982
_RS05660
BWI76_RS05665: BWI76_RS05665 - SAM-dependent methyltransferase, at 1,189,000 to 1,190,628
_RS05665
Position (kb)
1188
1189 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1187.168 kb on + strand, within BWI76_RS05650 at 1187.204 kb on + strand, within BWI76_RS05650 at 1187.214 kb on - strand, within BWI76_RS05650 at 1187.290 kb on + strand, within BWI76_RS05650 at 1187.304 kb on - strand, within BWI76_RS05650 at 1187.362 kb on + strand, within BWI76_RS05650 at 1187.370 kb on - strand, within BWI76_RS05650 at 1187.552 kb on + strand at 1187.560 kb on - strand at 1187.606 kb on + strand at 1187.669 kb on - strand at 1187.778 kb on - strand at 1187.824 kb on + strand at 1187.837 kb on + strand at 1187.837 kb on + strand at 1187.845 kb on - strand at 1187.845 kb on - strand at 1187.845 kb on - strand at 1187.845 kb on - strand at 1188.010 kb on + strand at 1188.204 kb on + strand, within BWI76_RS05655 at 1188.368 kb on - strand, within BWI76_RS05655 at 1188.377 kb on - strand, within BWI76_RS05655 at 1188.494 kb on + strand, within BWI76_RS05660 at 1188.494 kb on + strand, within BWI76_RS05660 at 1188.637 kb on + strand, within BWI76_RS05660 at 1188.680 kb on - strand, within BWI76_RS05660 at 1188.680 kb on - strand, within BWI76_RS05660 at 1188.725 kb on + strand, within BWI76_RS05660 at 1188.741 kb on + strand, within BWI76_RS05660 at 1188.741 kb on + strand, within BWI76_RS05660 at 1188.751 kb on + strand, within BWI76_RS05660 at 1188.785 kb on - strand, within BWI76_RS05660 at 1188.816 kb on + strand, within BWI76_RS05660 at 1188.824 kb on - strand, within BWI76_RS05660 at 1188.844 kb on - strand, within BWI76_RS05660 at 1188.853 kb on + strand, within BWI76_RS05660 at 1188.955 kb on + strand at 1189.046 kb on + strand at 1189.360 kb on - strand, within BWI76_RS05665
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 1,187,168 + BWI76_RS05650 0.65 -0.5 1,187,204 + BWI76_RS05650 0.68 -1.3 1,187,214 - BWI76_RS05650 0.69 -1.0 1,187,290 + BWI76_RS05650 0.76 -1.7 1,187,304 - BWI76_RS05650 0.77 -0.1 1,187,362 + BWI76_RS05650 0.82 +0.9 1,187,370 - BWI76_RS05650 0.82 -0.2 1,187,552 + -0.4 1,187,560 - +0.9 1,187,606 + +0.3 1,187,669 - +0.0 1,187,778 - +0.1 1,187,824 + +0.3 1,187,837 + +0.6 1,187,837 + +0.9 1,187,845 - +0.3 1,187,845 - -0.9 1,187,845 - +0.4 1,187,845 - +0.3 1,188,010 + -0.3 1,188,204 + BWI76_RS05655 0.16 +0.1 1,188,368 - BWI76_RS05655 0.79 +0.3 1,188,377 - BWI76_RS05655 0.83 +0.7 1,188,494 + BWI76_RS05660 0.11 -3.4 1,188,494 + BWI76_RS05660 0.11 +0.9 1,188,637 + BWI76_RS05660 0.37 +0.2 1,188,680 - BWI76_RS05660 0.45 +0.8 1,188,680 - BWI76_RS05660 0.45 -1.5 1,188,725 + BWI76_RS05660 0.53 +0.3 1,188,741 + BWI76_RS05660 0.56 -0.1 1,188,741 + BWI76_RS05660 0.56 +0.1 1,188,751 + BWI76_RS05660 0.58 +0.3 1,188,785 - BWI76_RS05660 0.64 +0.0 1,188,816 + BWI76_RS05660 0.70 -0.5 1,188,824 - BWI76_RS05660 0.71 -0.3 1,188,844 - BWI76_RS05660 0.75 -0.3 1,188,853 + BWI76_RS05660 0.76 +0.0 1,188,955 + -0.7 1,189,046 + -0.9 1,189,360 - BWI76_RS05665 0.22 -0.4
Or see this region's nucleotide sequence