Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08200 and BWI76_RS08205 are separated by 45 nucleotides BWI76_RS08205 and BWI76_RS08210 are separated by 8 nucleotides
BWI76_RS08200: BWI76_RS08200 - UMP phosphatase, at 1,734,685 to 1,735,437
_RS08200
BWI76_RS08205: BWI76_RS08205 - DNA-binding transcriptional dual regulator NagC, at 1,735,483 to 1,736,703
_RS08205
BWI76_RS08210: BWI76_RS08210 - N-acetylglucosamine-6-phosphate deacetylase, at 1,736,712 to 1,737,860
_RS08210
Position (kb)
1735
1736
1737 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3
4
5 at 1734.625 kb on + strand at 1734.655 kb on + strand at 1734.659 kb on + strand at 1734.659 kb on + strand at 1734.659 kb on + strand at 1734.659 kb on + strand at 1734.659 kb on + strand at 1734.659 kb on + strand at 1734.664 kb on + strand at 1734.667 kb on - strand at 1734.667 kb on - strand at 1734.667 kb on - strand at 1734.667 kb on - strand at 1734.667 kb on - strand at 1734.669 kb on + strand at 1734.669 kb on + strand at 1734.672 kb on - strand at 1734.672 kb on - strand at 1734.674 kb on + strand at 1734.677 kb on - strand at 1734.677 kb on - strand at 1734.677 kb on - strand at 1734.679 kb on - strand at 1734.679 kb on - strand at 1734.679 kb on - strand at 1734.728 kb on + strand at 1734.728 kb on + strand at 1734.750 kb on - strand at 1734.753 kb on - strand at 1734.775 kb on - strand, within BWI76_RS08200 at 1734.790 kb on + strand, within BWI76_RS08200 at 1734.790 kb on + strand, within BWI76_RS08200 at 1734.809 kb on - strand, within BWI76_RS08200 at 1734.831 kb on + strand, within BWI76_RS08200 at 1734.855 kb on + strand, within BWI76_RS08200 at 1734.856 kb on - strand, within BWI76_RS08200 at 1734.863 kb on - strand, within BWI76_RS08200 at 1734.863 kb on - strand, within BWI76_RS08200 at 1734.864 kb on - strand, within BWI76_RS08200 at 1735.133 kb on + strand, within BWI76_RS08200 at 1735.141 kb on - strand, within BWI76_RS08200 at 1735.236 kb on - strand, within BWI76_RS08200 at 1735.312 kb on - strand, within BWI76_RS08200 at 1735.433 kb on + strand at 1735.441 kb on - strand at 1735.514 kb on + strand at 1735.730 kb on + strand, within BWI76_RS08205 at 1735.915 kb on + strand, within BWI76_RS08205 at 1736.060 kb on - strand, within BWI76_RS08205 at 1736.300 kb on - strand, within BWI76_RS08205 at 1736.394 kb on - strand, within BWI76_RS08205 at 1736.430 kb on - strand, within BWI76_RS08205 at 1737.060 kb on - strand, within BWI76_RS08210 at 1737.418 kb on - strand, within BWI76_RS08210
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 1,734,625 + -0.9 1,734,655 + -1.2 1,734,659 + -0.8 1,734,659 + -0.1 1,734,659 + -2.3 1,734,659 + +3.0 1,734,659 + -0.5 1,734,659 + -2.1 1,734,664 + -2.0 1,734,667 - +0.4 1,734,667 - -0.1 1,734,667 - -0.2 1,734,667 - +2.4 1,734,667 - +0.1 1,734,669 + -0.2 1,734,669 + -0.5 1,734,672 - -1.0 1,734,672 - +0.8 1,734,674 + -0.8 1,734,677 - -1.5 1,734,677 - +0.9 1,734,677 - +5.3 1,734,679 - -0.7 1,734,679 - -0.0 1,734,679 - -0.5 1,734,728 + -0.5 1,734,728 + -0.0 1,734,750 - -0.8 1,734,753 - -0.7 1,734,775 - BWI76_RS08200 0.12 -0.6 1,734,790 + BWI76_RS08200 0.14 +1.2 1,734,790 + BWI76_RS08200 0.14 -0.0 1,734,809 - BWI76_RS08200 0.16 -1.4 1,734,831 + BWI76_RS08200 0.19 +0.3 1,734,855 + BWI76_RS08200 0.23 -0.2 1,734,856 - BWI76_RS08200 0.23 +0.2 1,734,863 - BWI76_RS08200 0.24 -0.7 1,734,863 - BWI76_RS08200 0.24 -0.1 1,734,864 - BWI76_RS08200 0.24 -1.7 1,735,133 + BWI76_RS08200 0.59 -1.0 1,735,141 - BWI76_RS08200 0.61 -0.7 1,735,236 - BWI76_RS08200 0.73 -1.2 1,735,312 - BWI76_RS08200 0.83 -1.8 1,735,433 + +0.2 1,735,441 - -0.4 1,735,514 + +0.4 1,735,730 + BWI76_RS08205 0.20 -2.5 1,735,915 + BWI76_RS08205 0.35 -0.2 1,736,060 - BWI76_RS08205 0.47 -2.8 1,736,300 - BWI76_RS08205 0.67 -4.8 1,736,394 - BWI76_RS08205 0.75 -2.6 1,736,430 - BWI76_RS08205 0.78 -1.1 1,737,060 - BWI76_RS08210 0.30 -1.8 1,737,418 - BWI76_RS08210 0.61 -2.8
Or see this region's nucleotide sequence