Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06505 and BWI76_RS06510 are separated by 303 nucleotides BWI76_RS06510 and BWI76_RS06515 overlap by 41 nucleotides BWI76_RS06515 and BWI76_RS06520 are separated by 207 nucleotides BWI76_RS06520 and BWI76_RS06525 are separated by 316 nucleotides
BWI76_RS06505: BWI76_RS06505 - hypothetical protein, at 1,367,325 to 1,367,903
_RS06505
BWI76_RS06510: BWI76_RS06510 - BolA family transcriptional regulator, at 1,368,207 to 1,368,524
_RS06510
BWI76_RS06515: BWI76_RS06515 - hypothetical protein, at 1,368,484 to 1,368,664
_RS06515
BWI76_RS06520: BWI76_RS06520 - trigger factor, at 1,368,872 to 1,370,170
_RS06520
BWI76_RS06525: BWI76_RS06525 - ATP-dependent Clp protease proteolytic subunit, at 1,370,487 to 1,371,110
_RS06525
Position (kb)
1368
1369
1370
1371 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1368.159 kb on + strand at 1368.214 kb on + strand at 1368.244 kb on - strand, within BWI76_RS06510 at 1368.276 kb on + strand, within BWI76_RS06510 at 1368.416 kb on - strand at 1368.456 kb on - strand, within BWI76_RS06510 at 1368.458 kb on - strand, within BWI76_RS06510 at 1368.458 kb on - strand, within BWI76_RS06510 at 1368.507 kb on + strand at 1368.515 kb on - strand at 1368.807 kb on - strand at 1368.967 kb on + strand at 1369.034 kb on + strand, within BWI76_RS06520 at 1369.227 kb on + strand, within BWI76_RS06520 at 1369.227 kb on + strand, within BWI76_RS06520 at 1369.280 kb on + strand, within BWI76_RS06520 at 1369.328 kb on + strand, within BWI76_RS06520 at 1369.782 kb on - strand, within BWI76_RS06520 at 1369.865 kb on - strand, within BWI76_RS06520 at 1369.900 kb on - strand, within BWI76_RS06520 at 1370.142 kb on + strand at 1370.182 kb on + strand at 1370.182 kb on + strand at 1370.369 kb on + strand at 1370.379 kb on - strand at 1370.397 kb on - strand at 1370.402 kb on - strand at 1370.523 kb on + strand at 1370.651 kb on + strand, within BWI76_RS06525 at 1370.854 kb on - strand, within BWI76_RS06525 at 1370.987 kb on - strand, within BWI76_RS06525 at 1371.000 kb on + strand, within BWI76_RS06525 at 1371.007 kb on + strand, within BWI76_RS06525
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 1,368,159 + -2.5 1,368,214 + -0.2 1,368,244 - BWI76_RS06510 0.12 +0.3 1,368,276 + BWI76_RS06510 0.22 +2.2 1,368,416 - -0.4 1,368,456 - BWI76_RS06510 0.78 -0.7 1,368,458 - BWI76_RS06510 0.79 -2.3 1,368,458 - BWI76_RS06510 0.79 +0.1 1,368,507 + +0.2 1,368,515 - +0.1 1,368,807 - -0.6 1,368,967 + -0.5 1,369,034 + BWI76_RS06520 0.12 -1.8 1,369,227 + BWI76_RS06520 0.27 -2.2 1,369,227 + BWI76_RS06520 0.27 -0.8 1,369,280 + BWI76_RS06520 0.31 -1.7 1,369,328 + BWI76_RS06520 0.35 +0.1 1,369,782 - BWI76_RS06520 0.70 -0.5 1,369,865 - BWI76_RS06520 0.76 -0.3 1,369,900 - BWI76_RS06520 0.79 -1.4 1,370,142 + -0.4 1,370,182 + +0.3 1,370,182 + -2.0 1,370,369 + +2.1 1,370,379 - +1.4 1,370,397 - +1.8 1,370,402 - +1.7 1,370,523 + +2.1 1,370,651 + BWI76_RS06525 0.26 +2.9 1,370,854 - BWI76_RS06525 0.59 +3.3 1,370,987 - BWI76_RS06525 0.80 +3.3 1,371,000 + BWI76_RS06525 0.82 +2.8 1,371,007 + BWI76_RS06525 0.83 +3.0
Or see this region's nucleotide sequence