Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27210 and BWI76_RS27215 overlap by 1 nucleotides BWI76_RS27215 and BWI76_RS27220 are separated by 59 nucleotides BWI76_RS27220 and BWI76_RS27225 are separated by 111 nucleotides BWI76_RS27225 and BWI76_RS27230 are separated by 245 nucleotides
BWI76_RS27210: BWI76_RS27210 - glycerol-3-phosphate dehydrogenase, at 5,648,179 to 5,649,195
_RS27210
BWI76_RS27215: BWI76_RS27215 - protein-export protein SecB, at 5,649,195 to 5,649,662
_RS27215
BWI76_RS27220: BWI76_RS27220 - glutaredoxin 3, at 5,649,722 to 5,649,973
_RS27220
BWI76_RS27225: BWI76_RS27225 - rhodanese-like domain-containing protein, at 5,650,085 to 5,650,516
_RS27225
BWI76_RS27230: BWI76_RS27230 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 5,650,762 to 5,652,306
_RS27230
Position (kb) 5650
5651 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5649.738 kb on - strand at 5649.898 kb on - strand, within BWI76_RS27220 at 5649.958 kb on - strand at 5650.117 kb on - strand at 5650.164 kb on - strand, within BWI76_RS27225 at 5650.175 kb on - strand, within BWI76_RS27225 at 5650.472 kb on + strand, within BWI76_RS27225 at 5650.561 kb on + strand at 5650.569 kb on - strand at 5650.686 kb on - strand at 5650.861 kb on + strand at 5650.957 kb on - strand, within BWI76_RS27230 at 5650.957 kb on - strand, within BWI76_RS27230 at 5650.965 kb on + strand, within BWI76_RS27230 at 5651.007 kb on - strand, within BWI76_RS27230 at 5651.048 kb on + strand, within BWI76_RS27230 at 5651.056 kb on - strand, within BWI76_RS27230 at 5651.061 kb on - strand, within BWI76_RS27230 at 5651.118 kb on - strand, within BWI76_RS27230 at 5651.289 kb on + strand, within BWI76_RS27230 at 5651.290 kb on + strand, within BWI76_RS27230 at 5651.362 kb on + strand, within BWI76_RS27230 at 5651.400 kb on + strand, within BWI76_RS27230 at 5651.502 kb on - strand, within BWI76_RS27230
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 5,649,738 - -1.0 5,649,898 - BWI76_RS27220 0.70 -0.7 5,649,958 - -0.7 5,650,117 - +1.7 5,650,164 - BWI76_RS27225 0.18 +0.1 5,650,175 - BWI76_RS27225 0.21 +3.2 5,650,472 + BWI76_RS27225 0.90 +0.0 5,650,561 + +0.1 5,650,569 - +2.2 5,650,686 - -2.0 5,650,861 + -2.0 5,650,957 - BWI76_RS27230 0.13 +0.6 5,650,957 - BWI76_RS27230 0.13 -0.7 5,650,965 + BWI76_RS27230 0.13 +1.2 5,651,007 - BWI76_RS27230 0.16 +0.2 5,651,048 + BWI76_RS27230 0.19 -0.3 5,651,056 - BWI76_RS27230 0.19 +0.1 5,651,061 - BWI76_RS27230 0.19 +3.7 5,651,118 - BWI76_RS27230 0.23 -1.4 5,651,289 + BWI76_RS27230 0.34 -0.4 5,651,290 + BWI76_RS27230 0.34 -0.1 5,651,362 + BWI76_RS27230 0.39 -2.7 5,651,400 + BWI76_RS27230 0.41 +0.0 5,651,502 - BWI76_RS27230 0.48 -1.0
Or see this region's nucleotide sequence