Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26180 and BWI76_RS26185 are separated by 59 nucleotides BWI76_RS26185 and BWI76_RS26190 are separated by 212 nucleotides BWI76_RS26190 and BWI76_RS26195 are separated by 52 nucleotides
BWI76_RS26180: BWI76_RS26180 - rhomboid family intramembrane serine protease GlpG, at 5,413,999 to 5,414,829
_RS26180
BWI76_RS26185: BWI76_RS26185 - thiosulfate sulfurtransferase, at 5,414,889 to 5,415,218
_RS26185
BWI76_RS26190: BWI76_RS26190 - glycerol-3-phosphate dehydrogenase, at 5,415,431 to 5,416,939
_RS26190
BWI76_RS26195: BWI76_RS26195 - glycogen phosphorylase, at 5,416,992 to 5,419,439
_RS26195
Position (kb) 5415
5416
5417 Strain fitness (log2 ratio) -2
-1
0
1 at 5414.447 kb on + strand, within BWI76_RS26180 at 5414.608 kb on + strand, within BWI76_RS26180 at 5414.785 kb on + strand at 5414.793 kb on - strand at 5414.886 kb on + strand at 5414.964 kb on - strand, within BWI76_RS26185 at 5415.134 kb on - strand, within BWI76_RS26185 at 5415.210 kb on - strand at 5415.280 kb on + strand at 5415.322 kb on - strand at 5415.341 kb on + strand at 5415.506 kb on + strand at 5415.564 kb on + strand at 5415.624 kb on + strand, within BWI76_RS26190 at 5415.748 kb on - strand, within BWI76_RS26190 at 5416.162 kb on + strand, within BWI76_RS26190 at 5416.170 kb on - strand, within BWI76_RS26190 at 5416.363 kb on + strand, within BWI76_RS26190 at 5416.492 kb on + strand, within BWI76_RS26190 at 5416.511 kb on - strand, within BWI76_RS26190 at 5416.568 kb on - strand, within BWI76_RS26190 at 5416.871 kb on - strand at 5417.029 kb on + strand at 5417.116 kb on + strand at 5417.116 kb on + strand at 5417.335 kb on + strand, within BWI76_RS26195 at 5417.336 kb on + strand, within BWI76_RS26195 at 5417.413 kb on - strand, within BWI76_RS26195 at 5417.540 kb on + strand, within BWI76_RS26195 at 5417.570 kb on - strand, within BWI76_RS26195 at 5417.788 kb on + strand, within BWI76_RS26195 at 5417.856 kb on - strand, within BWI76_RS26195 at 5417.879 kb on + strand, within BWI76_RS26195
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 5,414,447 + BWI76_RS26180 0.54 +0.9 5,414,608 + BWI76_RS26180 0.73 -1.0 5,414,785 + -0.7 5,414,793 - -2.0 5,414,886 + -1.0 5,414,964 - BWI76_RS26185 0.23 -0.4 5,415,134 - BWI76_RS26185 0.74 +0.1 5,415,210 - -0.5 5,415,280 + -1.7 5,415,322 - +0.9 5,415,341 + +0.8 5,415,506 + -0.0 5,415,564 + +0.3 5,415,624 + BWI76_RS26190 0.13 -1.7 5,415,748 - BWI76_RS26190 0.21 -0.3 5,416,162 + BWI76_RS26190 0.48 -1.3 5,416,170 - BWI76_RS26190 0.49 -1.7 5,416,363 + BWI76_RS26190 0.62 -1.2 5,416,492 + BWI76_RS26190 0.70 -0.9 5,416,511 - BWI76_RS26190 0.72 -1.6 5,416,568 - BWI76_RS26190 0.75 -0.7 5,416,871 - -1.7 5,417,029 + -0.1 5,417,116 + +1.3 5,417,116 + +0.1 5,417,335 + BWI76_RS26195 0.14 -0.9 5,417,336 + BWI76_RS26195 0.14 -1.5 5,417,413 - BWI76_RS26195 0.17 -0.2 5,417,540 + BWI76_RS26195 0.22 -1.4 5,417,570 - BWI76_RS26195 0.24 -2.4 5,417,788 + BWI76_RS26195 0.33 -0.3 5,417,856 - BWI76_RS26195 0.35 +1.0 5,417,879 + BWI76_RS26195 0.36 -1.5
Or see this region's nucleotide sequence