Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24375 and BWI76_RS24380 are separated by 30 nucleotides BWI76_RS24380 and BWI76_RS24385 overlap by 1 nucleotides BWI76_RS24385 and BWI76_RS24390 are separated by 24 nucleotides BWI76_RS24390 and BWI76_RS24395 overlap by 4 nucleotides
BWI76_RS24375: BWI76_RS24375 - DNA topoisomerase IV subunit B, at 5,080,927 to 5,082,822
_RS24375
BWI76_RS24380: BWI76_RS24380 - esterase YqiA, at 5,082,853 to 5,083,428
_RS24380
BWI76_RS24385: BWI76_RS24385 - phosphodiesterase, at 5,083,428 to 5,084,255
_RS24385
BWI76_RS24390: BWI76_RS24390 - hypothetical protein, at 5,084,280 to 5,084,702
_RS24390
BWI76_RS24395: BWI76_RS24395 - ADP-ribose diphosphatase, at 5,084,699 to 5,085,331
_RS24395
Position (kb) 5083
5084
5085 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5083.137 kb on + strand, within BWI76_RS24380 at 5083.179 kb on + strand, within BWI76_RS24380 at 5083.187 kb on - strand, within BWI76_RS24380 at 5083.298 kb on + strand, within BWI76_RS24380 at 5083.306 kb on - strand at 5083.340 kb on - strand, within BWI76_RS24380 at 5083.427 kb on - strand at 5083.522 kb on - strand, within BWI76_RS24385 at 5083.556 kb on + strand, within BWI76_RS24385 at 5083.578 kb on - strand, within BWI76_RS24385 at 5083.578 kb on - strand, within BWI76_RS24385 at 5083.578 kb on - strand, within BWI76_RS24385 at 5083.658 kb on + strand, within BWI76_RS24385 at 5083.726 kb on - strand, within BWI76_RS24385 at 5083.778 kb on + strand, within BWI76_RS24385 at 5083.849 kb on - strand at 5083.945 kb on + strand, within BWI76_RS24385 at 5084.023 kb on + strand, within BWI76_RS24385 at 5084.183 kb on + strand at 5084.434 kb on - strand, within BWI76_RS24390 at 5084.593 kb on - strand, within BWI76_RS24390 at 5084.767 kb on - strand, within BWI76_RS24395 at 5084.799 kb on + strand, within BWI76_RS24395 at 5084.807 kb on - strand, within BWI76_RS24395 at 5084.953 kb on - strand, within BWI76_RS24395 at 5084.963 kb on - strand at 5084.963 kb on - strand, within BWI76_RS24395 at 5084.971 kb on + strand, within BWI76_RS24395 at 5085.101 kb on - strand, within BWI76_RS24395 at 5085.142 kb on - strand, within BWI76_RS24395 at 5085.195 kb on - strand, within BWI76_RS24395 at 5085.220 kb on + strand, within BWI76_RS24395
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 5,083,137 + BWI76_RS24380 0.49 +1.0 5,083,179 + BWI76_RS24380 0.57 -0.2 5,083,187 - BWI76_RS24380 0.58 +0.3 5,083,298 + BWI76_RS24380 0.77 +0.3 5,083,306 - +0.8 5,083,340 - BWI76_RS24380 0.85 +0.0 5,083,427 - -0.2 5,083,522 - BWI76_RS24385 0.11 +0.4 5,083,556 + BWI76_RS24385 0.15 +1.8 5,083,578 - BWI76_RS24385 0.18 +0.6 5,083,578 - BWI76_RS24385 0.18 +0.7 5,083,578 - BWI76_RS24385 0.18 +1.1 5,083,658 + BWI76_RS24385 0.28 +0.4 5,083,726 - BWI76_RS24385 0.36 +1.1 5,083,778 + BWI76_RS24385 0.42 +1.5 5,083,849 - +0.0 5,083,945 + BWI76_RS24385 0.62 +1.1 5,084,023 + BWI76_RS24385 0.72 +2.1 5,084,183 + +0.6 5,084,434 - BWI76_RS24390 0.36 -0.8 5,084,593 - BWI76_RS24390 0.74 -0.6 5,084,767 - BWI76_RS24395 0.11 -0.1 5,084,799 + BWI76_RS24395 0.16 -1.2 5,084,807 - BWI76_RS24395 0.17 -2.3 5,084,953 - BWI76_RS24395 0.40 +0.5 5,084,963 - +1.6 5,084,963 - BWI76_RS24395 0.42 +0.1 5,084,971 + BWI76_RS24395 0.43 +0.3 5,085,101 - BWI76_RS24395 0.64 -0.5 5,085,142 - BWI76_RS24395 0.70 +0.8 5,085,195 - BWI76_RS24395 0.78 -0.7 5,085,220 + BWI76_RS24395 0.82 +0.6
Or see this region's nucleotide sequence