Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23070

Experiment: Parafilmed volatile agar plate with no fungus

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23060 and BWI76_RS23065 overlap by 8 nucleotidesBWI76_RS23065 and BWI76_RS23070 overlap by 11 nucleotidesBWI76_RS23070 and BWI76_RS23075 overlap by 7 nucleotides BWI76_RS23060: BWI76_RS23060 - cobalt-precorrin-4 C(11)-methyltransferase, at 4,808,592 to 4,809,365 _RS23060 BWI76_RS23065: BWI76_RS23065 - cobalt-precorrin-6Y C(15)-methyltransferase, at 4,809,358 to 4,809,927 _RS23065 BWI76_RS23070: BWI76_RS23070 - cobalt-precorrin-7 (C(5))-methyltransferase, at 4,809,917 to 4,810,522 _RS23070 BWI76_RS23075: BWI76_RS23075 - cobalt-precorrin-5B (C(1))-methyltransferase, at 4,810,516 to 4,811,655 _RS23075 Position (kb) 4809 4810 4811Strain fitness (log2 ratio) -2 -1 0 1 2at 4809.059 kb on - strand, within BWI76_RS23060at 4809.064 kb on - strand, within BWI76_RS23060at 4809.194 kb on - strand, within BWI76_RS23060at 4809.229 kb on + strand, within BWI76_RS23060at 4809.288 kb on - strandat 4809.411 kb on + strandat 4809.467 kb on + strand, within BWI76_RS23065at 4809.531 kb on + strand, within BWI76_RS23065at 4809.674 kb on + strand, within BWI76_RS23065at 4809.720 kb on + strand, within BWI76_RS23065at 4809.770 kb on - strand, within BWI76_RS23065at 4809.841 kb on - strand, within BWI76_RS23065at 4810.042 kb on - strand, within BWI76_RS23070at 4810.165 kb on - strand, within BWI76_RS23070at 4810.315 kb on - strand, within BWI76_RS23070at 4810.352 kb on - strand, within BWI76_RS23070at 4810.561 kb on + strandat 4810.649 kb on - strand, within BWI76_RS23075at 4810.702 kb on - strand, within BWI76_RS23075at 4810.847 kb on + strand, within BWI76_RS23075at 4810.886 kb on - strand, within BWI76_RS23075at 4810.969 kb on + strand, within BWI76_RS23075at 4811.080 kb on + strand, within BWI76_RS23075at 4811.082 kb on + strand, within BWI76_RS23075at 4811.090 kb on - strand, within BWI76_RS23075at 4811.262 kb on + strand, within BWI76_RS23075at 4811.304 kb on - strand, within BWI76_RS23075at 4811.461 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus
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4,809,059 - BWI76_RS23060 0.60 -2.7
4,809,064 - BWI76_RS23060 0.61 -0.3
4,809,194 - BWI76_RS23060 0.78 -0.4
4,809,229 + BWI76_RS23060 0.82 +0.1
4,809,288 - -0.6
4,809,411 + +0.7
4,809,467 + BWI76_RS23065 0.19 +0.8
4,809,531 + BWI76_RS23065 0.30 +0.9
4,809,674 + BWI76_RS23065 0.55 +1.0
4,809,720 + BWI76_RS23065 0.64 +1.1
4,809,770 - BWI76_RS23065 0.72 -2.3
4,809,841 - BWI76_RS23065 0.85 -0.7
4,810,042 - BWI76_RS23070 0.21 -0.9
4,810,165 - BWI76_RS23070 0.41 -1.5
4,810,315 - BWI76_RS23070 0.66 -0.1
4,810,352 - BWI76_RS23070 0.72 -2.0
4,810,561 + -1.5
4,810,649 - BWI76_RS23075 0.12 -1.3
4,810,702 - BWI76_RS23075 0.16 +0.3
4,810,847 + BWI76_RS23075 0.29 +0.1
4,810,886 - BWI76_RS23075 0.32 -1.1
4,810,969 + BWI76_RS23075 0.40 -1.2
4,811,080 + BWI76_RS23075 0.49 +1.3
4,811,082 + BWI76_RS23075 0.50 +0.1
4,811,090 - BWI76_RS23075 0.50 -0.5
4,811,262 + BWI76_RS23075 0.65 -0.3
4,811,304 - BWI76_RS23075 0.69 +0.0
4,811,461 - +2.6

Or see this region's nucleotide sequence