Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22635 and BWI76_RS22640 overlap by 4 nucleotides BWI76_RS22640 and BWI76_RS22645 are separated by 65 nucleotides BWI76_RS22645 and BWI76_RS22650 are separated by 158 nucleotides
BWI76_RS22635: BWI76_RS22635 - MFS transporter, at 4,718,449 to 4,719,663
_RS22635
BWI76_RS22640: BWI76_RS22640 - hypothetical protein, at 4,719,660 to 4,720,037
_RS22640
BWI76_RS22645: BWI76_RS22645 - RNA polymerase sigma factor RpoS, at 4,720,103 to 4,721,095
_RS22645
BWI76_RS22650: BWI76_RS22650 - lipoprotein NlpD, at 4,721,254 to 4,722,372
_RS22650
Position (kb) 4720
4721
4722 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4719.391 kb on + strand, within BWI76_RS22635 at 4719.399 kb on - strand, within BWI76_RS22635 at 4719.458 kb on - strand, within BWI76_RS22635 at 4719.536 kb on + strand, within BWI76_RS22635 at 4719.652 kb on - strand at 4719.904 kb on + strand, within BWI76_RS22640 at 4719.917 kb on - strand, within BWI76_RS22640 at 4720.041 kb on - strand at 4720.112 kb on + strand at 4720.220 kb on + strand, within BWI76_RS22645 at 4720.220 kb on + strand, within BWI76_RS22645 at 4720.258 kb on + strand, within BWI76_RS22645 at 4720.279 kb on - strand, within BWI76_RS22645 at 4720.785 kb on - strand, within BWI76_RS22645 at 4720.919 kb on - strand, within BWI76_RS22645 at 4721.005 kb on - strand at 4721.125 kb on - strand at 4721.329 kb on + strand at 4721.337 kb on - strand at 4721.337 kb on - strand at 4721.344 kb on + strand at 4721.347 kb on - strand at 4721.475 kb on + strand, within BWI76_RS22650 at 4721.526 kb on + strand, within BWI76_RS22650 at 4721.746 kb on + strand, within BWI76_RS22650 at 4721.746 kb on + strand, within BWI76_RS22650 at 4722.010 kb on - strand, within BWI76_RS22650 at 4722.040 kb on - strand, within BWI76_RS22650 at 4722.093 kb on - strand, within BWI76_RS22650
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 4,719,391 + BWI76_RS22635 0.78 -2.4 4,719,399 - BWI76_RS22635 0.78 +2.1 4,719,458 - BWI76_RS22635 0.83 +0.3 4,719,536 + BWI76_RS22635 0.89 +0.9 4,719,652 - +1.0 4,719,904 + BWI76_RS22640 0.65 -1.7 4,719,917 - BWI76_RS22640 0.68 +0.1 4,720,041 - -2.2 4,720,112 + +0.6 4,720,220 + BWI76_RS22645 0.12 +0.0 4,720,220 + BWI76_RS22645 0.12 +0.7 4,720,258 + BWI76_RS22645 0.16 +2.6 4,720,279 - BWI76_RS22645 0.18 +1.9 4,720,785 - BWI76_RS22645 0.69 +1.2 4,720,919 - BWI76_RS22645 0.82 +0.4 4,721,005 - -1.0 4,721,125 - -0.0 4,721,329 + +0.5 4,721,337 - +0.8 4,721,337 - +0.4 4,721,344 + +0.3 4,721,347 - +0.6 4,721,475 + BWI76_RS22650 0.20 +1.0 4,721,526 + BWI76_RS22650 0.24 -0.5 4,721,746 + BWI76_RS22650 0.44 -0.2 4,721,746 + BWI76_RS22650 0.44 +0.5 4,722,010 - BWI76_RS22650 0.68 +0.7 4,722,040 - BWI76_RS22650 0.70 +2.6 4,722,093 - BWI76_RS22650 0.75 -0.7
Or see this region's nucleotide sequence