Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08660

Experiment: Parafilmed volatile agar plate with no fungus

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS08655 and BWI76_RS08660 are separated by 0 nucleotidesBWI76_RS08660 and BWI76_RS08665 are separated by 221 nucleotides BWI76_RS08655: BWI76_RS08655 - molybdenum ABC transporter ATP-binding protein, at 1,824,788 to 1,825,846 _RS08655 BWI76_RS08660: BWI76_RS08660 - pyridoxal phosphatase, at 1,825,847 to 1,826,665 _RS08660 BWI76_RS08665: BWI76_RS08665 - 6-phosphogluconolactonase, at 1,826,887 to 1,827,882 _RS08665 Position (kb) 1825 1826 1827Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 1824.893 kb on + strandat 1824.907 kb on + strand, within BWI76_RS08655at 1825.150 kb on + strand, within BWI76_RS08655at 1825.464 kb on - strand, within BWI76_RS08655at 1825.819 kb on + strandat 1825.928 kb on - strandat 1826.051 kb on + strand, within BWI76_RS08660at 1826.065 kb on - strand, within BWI76_RS08660at 1826.127 kb on + strand, within BWI76_RS08660at 1826.205 kb on + strand, within BWI76_RS08660at 1826.205 kb on + strand, within BWI76_RS08660at 1826.351 kb on - strand, within BWI76_RS08660at 1826.544 kb on + strand, within BWI76_RS08660at 1826.647 kb on - strandat 1826.709 kb on - strandat 1826.714 kb on + strandat 1826.714 kb on + strandat 1827.049 kb on + strand, within BWI76_RS08665at 1827.097 kb on + strand, within BWI76_RS08665at 1827.097 kb on + strand, within BWI76_RS08665at 1827.200 kb on + strand, within BWI76_RS08665at 1827.543 kb on - strand, within BWI76_RS08665at 1827.612 kb on + strand, within BWI76_RS08665

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Per-strain Table

Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus
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1,824,893 + +2.4
1,824,907 + BWI76_RS08655 0.11 +1.0
1,825,150 + BWI76_RS08655 0.34 +1.5
1,825,464 - BWI76_RS08655 0.64 +0.3
1,825,819 + +1.1
1,825,928 - -0.1
1,826,051 + BWI76_RS08660 0.25 +0.5
1,826,065 - BWI76_RS08660 0.27 +1.6
1,826,127 + BWI76_RS08660 0.34 -1.2
1,826,205 + BWI76_RS08660 0.44 +0.2
1,826,205 + BWI76_RS08660 0.44 -0.1
1,826,351 - BWI76_RS08660 0.62 -0.4
1,826,544 + BWI76_RS08660 0.85 +5.5
1,826,647 - +0.4
1,826,709 - -0.6
1,826,714 + +0.3
1,826,714 + -2.2
1,827,049 + BWI76_RS08665 0.16 -0.2
1,827,097 + BWI76_RS08665 0.21 -1.4
1,827,097 + BWI76_RS08665 0.21 +0.9
1,827,200 + BWI76_RS08665 0.31 -0.6
1,827,543 - BWI76_RS08665 0.66 -0.1
1,827,612 + BWI76_RS08665 0.73 +0.0

Or see this region's nucleotide sequence