Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08645 and BWI76_RS08650 overlap by 1 nucleotides BWI76_RS08650 and BWI76_RS08655 are separated by 2 nucleotides BWI76_RS08655 and BWI76_RS08660 are separated by 0 nucleotides
BWI76_RS08645: BWI76_RS08645 - molybdate ABC transporter substrate-binding protein, at 1,823,323 to 1,824,096
_RS08645
BWI76_RS08650: BWI76_RS08650 - molybdate ABC transporter permease, at 1,824,096 to 1,824,785
_RS08650
BWI76_RS08655: BWI76_RS08655 - molybdenum ABC transporter ATP-binding protein, at 1,824,788 to 1,825,846
_RS08655
BWI76_RS08660: BWI76_RS08660 - pyridoxal phosphatase, at 1,825,847 to 1,826,665
_RS08660
Position (kb) 1824
1825
1826 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 1823.906 kb on + strand, within BWI76_RS08645 at 1824.126 kb on + strand at 1824.170 kb on - strand, within BWI76_RS08650 at 1824.284 kb on - strand, within BWI76_RS08650 at 1824.809 kb on - strand at 1824.893 kb on + strand at 1824.907 kb on + strand, within BWI76_RS08655 at 1825.150 kb on + strand, within BWI76_RS08655 at 1825.464 kb on - strand, within BWI76_RS08655 at 1825.819 kb on + strand at 1825.928 kb on - strand at 1826.051 kb on + strand, within BWI76_RS08660 at 1826.065 kb on - strand, within BWI76_RS08660 at 1826.127 kb on + strand, within BWI76_RS08660 at 1826.205 kb on + strand, within BWI76_RS08660 at 1826.205 kb on + strand, within BWI76_RS08660 at 1826.351 kb on - strand, within BWI76_RS08660 at 1826.544 kb on + strand, within BWI76_RS08660 at 1826.647 kb on - strand at 1826.709 kb on - strand at 1826.714 kb on + strand at 1826.714 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 1,823,906 + BWI76_RS08645 0.75 +1.8 1,824,126 + +2.3 1,824,170 - BWI76_RS08650 0.11 +0.9 1,824,284 - BWI76_RS08650 0.27 +2.9 1,824,809 - +2.0 1,824,893 + +2.4 1,824,907 + BWI76_RS08655 0.11 +1.0 1,825,150 + BWI76_RS08655 0.34 +1.5 1,825,464 - BWI76_RS08655 0.64 +0.3 1,825,819 + +1.1 1,825,928 - -0.1 1,826,051 + BWI76_RS08660 0.25 +0.5 1,826,065 - BWI76_RS08660 0.27 +1.6 1,826,127 + BWI76_RS08660 0.34 -1.2 1,826,205 + BWI76_RS08660 0.44 +0.2 1,826,205 + BWI76_RS08660 0.44 -0.1 1,826,351 - BWI76_RS08660 0.62 -0.4 1,826,544 + BWI76_RS08660 0.85 +5.5 1,826,647 - +0.4 1,826,709 - -0.6 1,826,714 + +0.3 1,826,714 + -2.2
Or see this region's nucleotide sequence