Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03690 and BWI76_RS03695 are separated by 177 nucleotides BWI76_RS03695 and BWI76_RS03700 are separated by 339 nucleotides BWI76_RS03700 and BWI76_RS03705 are separated by 6 nucleotides
BWI76_RS03690: BWI76_RS03690 - transcriptional regulator, GntR family/aminotransferase family protein, at 766,318 to 767,730
_RS03690
BWI76_RS03695: BWI76_RS03695 - DUF1127 domain-containing protein, at 767,908 to 768,072
_RS03695
BWI76_RS03700: BWI76_RS03700 - hypothetical protein, at 768,412 to 768,876
_RS03700
BWI76_RS03705: BWI76_RS03705 - secretion protein, at 768,883 to 769,950
_RS03705
Position (kb) 768
769 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 767.598 kb on + strand at 767.666 kb on + strand at 767.720 kb on - strand at 767.900 kb on - strand at 768.197 kb on - strand at 768.262 kb on - strand at 768.266 kb on + strand at 768.297 kb on - strand at 768.297 kb on - strand at 768.297 kb on - strand at 768.610 kb on - strand, within BWI76_RS03700 at 768.637 kb on - strand, within BWI76_RS03700 at 768.673 kb on - strand, within BWI76_RS03700 at 768.914 kb on + strand at 768.922 kb on - strand at 768.950 kb on - strand at 769.219 kb on - strand, within BWI76_RS03705 at 769.228 kb on + strand, within BWI76_RS03705 at 769.228 kb on + strand, within BWI76_RS03705 at 769.228 kb on + strand, within BWI76_RS03705 at 769.236 kb on - strand, within BWI76_RS03705 at 769.247 kb on + strand, within BWI76_RS03705 at 769.317 kb on - strand, within BWI76_RS03705 at 769.529 kb on + strand, within BWI76_RS03705 at 769.532 kb on - strand, within BWI76_RS03705 at 769.532 kb on - strand, within BWI76_RS03705 at 769.537 kb on + strand, within BWI76_RS03705 at 769.640 kb on - strand, within BWI76_RS03705 at 769.732 kb on - strand, within BWI76_RS03705 at 769.869 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 767,598 + -0.1 767,666 + -0.1 767,720 - -0.6 767,900 - +0.4 768,197 - -0.5 768,262 - +0.4 768,266 + +0.3 768,297 - -0.6 768,297 - -2.4 768,297 - +0.9 768,610 - BWI76_RS03700 0.43 +1.8 768,637 - BWI76_RS03700 0.48 +3.4 768,673 - BWI76_RS03700 0.56 +0.7 768,914 + -2.2 768,922 - -0.5 768,950 - +0.1 769,219 - BWI76_RS03705 0.31 -0.5 769,228 + BWI76_RS03705 0.32 -0.3 769,228 + BWI76_RS03705 0.32 +1.4 769,228 + BWI76_RS03705 0.32 -1.7 769,236 - BWI76_RS03705 0.33 +0.4 769,247 + BWI76_RS03705 0.34 +0.8 769,317 - BWI76_RS03705 0.41 -0.7 769,529 + BWI76_RS03705 0.60 +0.7 769,532 - BWI76_RS03705 0.61 -3.2 769,532 - BWI76_RS03705 0.61 +0.5 769,537 + BWI76_RS03705 0.61 +2.8 769,640 - BWI76_RS03705 0.71 -1.5 769,732 - BWI76_RS03705 0.79 -0.8 769,869 - +1.4
Or see this region's nucleotide sequence