Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23620

Experiment: Parafilmed volatile agar plate with no fungus

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23615 and BWI76_RS23620 overlap by 4 nucleotidesBWI76_RS23620 and BWI76_RS23625 overlap by 4 nucleotides BWI76_RS23615: BWI76_RS23615 - multidrug transporter, at 4,923,292 to 4,925,235 _RS23615 BWI76_RS23620: BWI76_RS23620 - multidrug resistance transporter, at 4,925,232 to 4,926,710 _RS23620 BWI76_RS23625: BWI76_RS23625 - helix-turn-helix transcriptional regulator, at 4,926,707 to 4,929,418 _RS23625 Position (kb) 4925 4926 4927Strain fitness (log2 ratio) -2 -1 0 1at 4924.341 kb on + strand, within BWI76_RS23615at 4924.520 kb on - strand, within BWI76_RS23615at 4924.589 kb on + strand, within BWI76_RS23615at 4924.682 kb on - strand, within BWI76_RS23615at 4924.700 kb on + strand, within BWI76_RS23615at 4924.717 kb on + strand, within BWI76_RS23615at 4924.725 kb on - strand, within BWI76_RS23615at 4924.802 kb on - strand, within BWI76_RS23615at 4924.876 kb on + strand, within BWI76_RS23615at 4924.909 kb on - strand, within BWI76_RS23615at 4925.081 kb on + strandat 4925.393 kb on - strand, within BWI76_RS23620at 4925.566 kb on - strand, within BWI76_RS23620at 4925.596 kb on + strand, within BWI76_RS23620at 4925.604 kb on - strand, within BWI76_RS23620at 4925.802 kb on - strand, within BWI76_RS23620at 4925.833 kb on - strand, within BWI76_RS23620at 4925.894 kb on - strand, within BWI76_RS23620at 4925.900 kb on + strand, within BWI76_RS23620at 4925.901 kb on - strand, within BWI76_RS23620at 4926.115 kb on + strand, within BWI76_RS23620at 4926.115 kb on + strand, within BWI76_RS23620at 4926.285 kb on - strand, within BWI76_RS23620at 4926.392 kb on + strand, within BWI76_RS23620at 4926.637 kb on + strandat 4926.694 kb on - strandat 4926.841 kb on + strandat 4927.036 kb on + strand, within BWI76_RS23625at 4927.176 kb on + strand, within BWI76_RS23625at 4927.191 kb on - strand, within BWI76_RS23625at 4927.229 kb on - strand, within BWI76_RS23625at 4927.540 kb on + strand, within BWI76_RS23625at 4927.614 kb on - strand, within BWI76_RS23625at 4927.647 kb on - strand, within BWI76_RS23625at 4927.688 kb on - strand, within BWI76_RS23625

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Per-strain Table

Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus
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4,924,341 + BWI76_RS23615 0.54 -1.1
4,924,520 - BWI76_RS23615 0.63 -2.2
4,924,589 + BWI76_RS23615 0.67 +1.4
4,924,682 - BWI76_RS23615 0.72 -1.0
4,924,700 + BWI76_RS23615 0.72 -0.3
4,924,717 + BWI76_RS23615 0.73 -2.6
4,924,725 - BWI76_RS23615 0.74 +1.1
4,924,802 - BWI76_RS23615 0.78 +0.3
4,924,876 + BWI76_RS23615 0.81 +0.3
4,924,909 - BWI76_RS23615 0.83 +0.5
4,925,081 + -0.7
4,925,393 - BWI76_RS23620 0.11 -1.3
4,925,566 - BWI76_RS23620 0.23 -0.0
4,925,596 + BWI76_RS23620 0.25 -0.3
4,925,604 - BWI76_RS23620 0.25 -0.6
4,925,802 - BWI76_RS23620 0.39 +0.3
4,925,833 - BWI76_RS23620 0.41 -1.0
4,925,894 - BWI76_RS23620 0.45 -0.0
4,925,900 + BWI76_RS23620 0.45 -1.2
4,925,901 - BWI76_RS23620 0.45 -0.4
4,926,115 + BWI76_RS23620 0.60 +0.0
4,926,115 + BWI76_RS23620 0.60 -0.7
4,926,285 - BWI76_RS23620 0.71 -0.9
4,926,392 + BWI76_RS23620 0.78 -1.2
4,926,637 + +1.1
4,926,694 - -0.4
4,926,841 + +0.3
4,927,036 + BWI76_RS23625 0.12 -1.6
4,927,176 + BWI76_RS23625 0.17 -0.1
4,927,191 - BWI76_RS23625 0.18 -0.2
4,927,229 - BWI76_RS23625 0.19 +0.2
4,927,540 + BWI76_RS23625 0.31 +0.0
4,927,614 - BWI76_RS23625 0.33 -0.0
4,927,647 - BWI76_RS23625 0.35 -0.7
4,927,688 - BWI76_RS23625 0.36 -0.0

Or see this region's nucleotide sequence