Experiment: R2A control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14155 and BWI76_RS14160 are separated by 11 nucleotides BWI76_RS14160 and BWI76_RS14165 are separated by 243 nucleotides
BWI76_RS14155: BWI76_RS14155 - transketolase, at 2,961,519 to 2,962,538
_RS14155
BWI76_RS14160: BWI76_RS14160 - ABC transporter substrate-binding protein, at 2,962,550 to 2,963,512
_RS14160
BWI76_RS14165: BWI76_RS14165 - trans-acting regulatory protein of aco operon, at 2,963,756 to 2,966,509
_RS14165
Position (kb)
2962
2963
2964 Strain fitness (log2 ratio)
-1
0
1 at 2961.600 kb on - strand at 2961.600 kb on - strand at 2961.602 kb on + strand at 2962.064 kb on + strand, within BWI76_RS14155 at 2962.351 kb on - strand, within BWI76_RS14155 at 2962.356 kb on - strand, within BWI76_RS14155 at 2962.457 kb on - strand at 2962.690 kb on - strand, within BWI76_RS14160 at 2962.964 kb on + strand, within BWI76_RS14160 at 2963.020 kb on - strand, within BWI76_RS14160 at 2963.198 kb on - strand, within BWI76_RS14160 at 2963.241 kb on + strand, within BWI76_RS14160 at 2963.375 kb on + strand, within BWI76_RS14160 at 2963.388 kb on + strand, within BWI76_RS14160 at 2963.481 kb on + strand at 2963.481 kb on + strand at 2963.557 kb on + strand at 2963.826 kb on - strand at 2964.005 kb on - strand at 2964.137 kb on - strand, within BWI76_RS14165 at 2964.246 kb on - strand, within BWI76_RS14165 at 2964.290 kb on - strand, within BWI76_RS14165 at 2964.461 kb on - strand, within BWI76_RS14165
Per-strain Table
Position Strand Gene LocusTag Fraction R2A control remove 2,961,600 - -0.1 2,961,600 - -0.3 2,961,602 + -0.6 2,962,064 + BWI76_RS14155 0.53 -0.0 2,962,351 - BWI76_RS14155 0.82 -1.5 2,962,356 - BWI76_RS14155 0.82 -0.1 2,962,457 - -0.1 2,962,690 - BWI76_RS14160 0.15 -1.2 2,962,964 + BWI76_RS14160 0.43 -1.6 2,963,020 - BWI76_RS14160 0.49 -1.0 2,963,198 - BWI76_RS14160 0.67 -0.3 2,963,241 + BWI76_RS14160 0.72 +0.0 2,963,375 + BWI76_RS14160 0.86 -0.6 2,963,388 + BWI76_RS14160 0.87 +1.3 2,963,481 + +1.1 2,963,481 + +0.1 2,963,557 + -0.0 2,963,826 - +0.1 2,964,005 - -0.2 2,964,137 - BWI76_RS14165 0.14 +0.2 2,964,246 - BWI76_RS14165 0.18 +0.1 2,964,290 - BWI76_RS14165 0.19 -0.8 2,964,461 - BWI76_RS14165 0.26 -0.1
Or see this region's nucleotide sequence