Experiment: R2A control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07550 and BWI76_RS07555 are separated by 469 nucleotides BWI76_RS07555 and BWI76_RS07560 are separated by 108 nucleotides
BWI76_RS07550: BWI76_RS07550 - Zn-dependent hydrolase, at 1,597,938 to 1,599,206
_RS07550
BWI76_RS07555: BWI76_RS07555 - EamA family transporter, at 1,599,676 to 1,600,566
_RS07555
BWI76_RS07560: BWI76_RS07560 - aminotransferase regulator domain-containing protein, at 1,600,675 to 1,602,009
_RS07560
Position (kb)
1599
1600
1601 Strain fitness (log2 ratio)
-1
0
1
2 at 1598.774 kb on + strand, within BWI76_RS07550 at 1598.852 kb on + strand, within BWI76_RS07550 at 1599.053 kb on + strand, within BWI76_RS07550 at 1599.226 kb on - strand at 1599.428 kb on + strand at 1599.602 kb on - strand at 1599.905 kb on + strand, within BWI76_RS07555 at 1599.910 kb on + strand, within BWI76_RS07555 at 1599.918 kb on - strand, within BWI76_RS07555 at 1600.059 kb on - strand at 1600.094 kb on + strand, within BWI76_RS07555 at 1600.130 kb on + strand, within BWI76_RS07555 at 1600.294 kb on - strand, within BWI76_RS07555 at 1600.516 kb on - strand at 1600.516 kb on - strand at 1600.618 kb on - strand at 1600.749 kb on - strand at 1600.771 kb on - strand at 1600.969 kb on + strand, within BWI76_RS07560 at 1600.982 kb on - strand, within BWI76_RS07560 at 1601.156 kb on + strand, within BWI76_RS07560 at 1601.225 kb on - strand, within BWI76_RS07560 at 1601.352 kb on - strand, within BWI76_RS07560 at 1601.471 kb on - strand, within BWI76_RS07560
Per-strain Table
Position Strand Gene LocusTag Fraction R2A control remove 1,598,774 + BWI76_RS07550 0.66 +0.3 1,598,852 + BWI76_RS07550 0.72 -0.3 1,599,053 + BWI76_RS07550 0.88 -1.4 1,599,226 - +0.5 1,599,428 + +0.4 1,599,602 - -0.6 1,599,905 + BWI76_RS07555 0.26 +0.6 1,599,910 + BWI76_RS07555 0.26 -0.0 1,599,918 - BWI76_RS07555 0.27 +0.0 1,600,059 - +0.5 1,600,094 + BWI76_RS07555 0.47 +1.5 1,600,130 + BWI76_RS07555 0.51 +0.1 1,600,294 - BWI76_RS07555 0.69 +0.7 1,600,516 - +0.0 1,600,516 - +2.0 1,600,618 - +0.8 1,600,749 - -0.5 1,600,771 - +0.2 1,600,969 + BWI76_RS07560 0.22 -0.4 1,600,982 - BWI76_RS07560 0.23 -0.3 1,601,156 + BWI76_RS07560 0.36 +0.2 1,601,225 - BWI76_RS07560 0.41 -0.3 1,601,352 - BWI76_RS07560 0.51 +0.6 1,601,471 - BWI76_RS07560 0.60 +0.0
Or see this region's nucleotide sequence