Experiment: R2A control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21250 and BWI76_RS21255 overlap by 14 nucleotides BWI76_RS21255 and BWI76_RS21260 are separated by 13 nucleotides
BWI76_RS21250: BWI76_RS21250 - two-component system response regulator GlrR, at 4,448,887 to 4,450,224
_RS21250
BWI76_RS21255: BWI76_RS21255 - hypothetical protein, at 4,450,211 to 4,450,915
_RS21255
BWI76_RS21260: BWI76_RS21260 - two-component sensor histidine kinase, at 4,450,929 to 4,452,383
_RS21260
Position (kb)
4450
4451 Strain fitness (log2 ratio)
-1
0
1 at 4449.382 kb on - strand, within BWI76_RS21250 at 4449.451 kb on + strand, within BWI76_RS21250 at 4449.855 kb on + strand at 4449.875 kb on + strand, within BWI76_RS21250 at 4449.883 kb on - strand, within BWI76_RS21250 at 4449.962 kb on - strand, within BWI76_RS21250 at 4449.962 kb on - strand, within BWI76_RS21250 at 4450.023 kb on + strand, within BWI76_RS21250 at 4450.055 kb on + strand, within BWI76_RS21250 at 4450.420 kb on - strand, within BWI76_RS21255 at 4450.468 kb on - strand, within BWI76_RS21255 at 4450.473 kb on + strand, within BWI76_RS21255 at 4450.481 kb on - strand at 4450.524 kb on - strand, within BWI76_RS21255 at 4450.689 kb on + strand, within BWI76_RS21255 at 4451.054 kb on + strand at 4451.054 kb on + strand at 4451.054 kb on + strand at 4451.062 kb on - strand at 4451.088 kb on - strand, within BWI76_RS21260 at 4451.483 kb on - strand, within BWI76_RS21260 at 4451.546 kb on + strand, within BWI76_RS21260 at 4451.694 kb on + strand, within BWI76_RS21260
Per-strain Table
Position Strand Gene LocusTag Fraction R2A control remove 4,449,382 - BWI76_RS21250 0.37 -0.5 4,449,451 + BWI76_RS21250 0.42 -0.9 4,449,855 + -1.3 4,449,875 + BWI76_RS21250 0.74 -0.5 4,449,883 - BWI76_RS21250 0.74 -0.1 4,449,962 - BWI76_RS21250 0.80 -0.2 4,449,962 - BWI76_RS21250 0.80 -0.7 4,450,023 + BWI76_RS21250 0.85 -0.4 4,450,055 + BWI76_RS21250 0.87 -0.3 4,450,420 - BWI76_RS21255 0.30 -0.5 4,450,468 - BWI76_RS21255 0.36 -0.6 4,450,473 + BWI76_RS21255 0.37 -0.8 4,450,481 - +1.0 4,450,524 - BWI76_RS21255 0.44 -0.7 4,450,689 + BWI76_RS21255 0.68 -0.3 4,451,054 + -0.6 4,451,054 + -0.0 4,451,054 + -0.5 4,451,062 - -0.7 4,451,088 - BWI76_RS21260 0.11 +0.8 4,451,483 - BWI76_RS21260 0.38 -0.2 4,451,546 + BWI76_RS21260 0.42 -0.7 4,451,694 + BWI76_RS21260 0.53 -1.0
Or see this region's nucleotide sequence