Experiment: R2A control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16660 and BWI76_RS16665 are separated by 1 nucleotides BWI76_RS16665 and BWI76_RS16670 are separated by 22 nucleotides BWI76_RS16670 and BWI76_RS16675 are separated by 62 nucleotides
BWI76_RS16660: BWI76_RS16660 - SfnB family sulfur acquisition oxidoreductase, at 3,447,939 to 3,449,162
_RS16660
BWI76_RS16665: BWI76_RS16665 - ABC transporter permease, at 3,449,164 to 3,449,838
_RS16665
BWI76_RS16670: BWI76_RS16670 - NLPA lipoprotein, at 3,449,861 to 3,450,637
_RS16670
BWI76_RS16675: BWI76_RS16675 - ABC transporter, at 3,450,700 to 3,451,746
_RS16675
Position (kb)
3449
3450 Strain fitness (log2 ratio)
-1
0
1 at 3448.498 kb on - strand, within BWI76_RS16660 at 3448.626 kb on - strand, within BWI76_RS16660 at 3448.819 kb on + strand, within BWI76_RS16660 at 3448.958 kb on + strand, within BWI76_RS16660 at 3449.066 kb on + strand at 3449.513 kb on - strand, within BWI76_RS16665 at 3449.537 kb on + strand, within BWI76_RS16665 at 3449.538 kb on - strand, within BWI76_RS16665 at 3449.712 kb on - strand, within BWI76_RS16665 at 3449.880 kb on + strand at 3450.033 kb on + strand, within BWI76_RS16670 at 3450.041 kb on - strand, within BWI76_RS16670 at 3450.124 kb on - strand, within BWI76_RS16670 at 3450.255 kb on - strand, within BWI76_RS16670 at 3450.465 kb on + strand, within BWI76_RS16670 at 3450.581 kb on - strand at 3450.591 kb on + strand at 3450.761 kb on - strand at 3450.767 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A control remove 3,448,498 - BWI76_RS16660 0.46 -0.7 3,448,626 - BWI76_RS16660 0.56 +0.1 3,448,819 + BWI76_RS16660 0.72 +0.3 3,448,958 + BWI76_RS16660 0.83 +0.1 3,449,066 + +0.1 3,449,513 - BWI76_RS16665 0.52 +0.5 3,449,537 + BWI76_RS16665 0.55 -0.3 3,449,538 - BWI76_RS16665 0.55 +1.0 3,449,712 - BWI76_RS16665 0.81 +0.4 3,449,880 + -1.2 3,450,033 + BWI76_RS16670 0.22 +0.0 3,450,041 - BWI76_RS16670 0.23 -0.1 3,450,124 - BWI76_RS16670 0.34 +0.1 3,450,255 - BWI76_RS16670 0.51 +0.1 3,450,465 + BWI76_RS16670 0.78 +0.1 3,450,581 - +0.4 3,450,591 + -0.0 3,450,761 - -1.3 3,450,767 - +0.1
Or see this region's nucleotide sequence