Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24465 and BWI76_RS24470 are separated by 214 nucleotides BWI76_RS24470 and BWI76_RS24475 are separated by 60 nucleotides
BWI76_RS24465: BWI76_RS24465 - adenylate cyclase, at 5,102,234 to 5,103,532
_RS24465
BWI76_RS24470: BWI76_RS24470 - hypothetical protein, at 5,103,747 to 5,104,367
_RS24470
BWI76_RS24475: BWI76_RS24475 - multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase, at 5,104,428 to 5,105,669
_RS24475
Position (kb)
5103
5104
5105 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5102.925 kb on + strand, within BWI76_RS24465 at 5102.996 kb on - strand, within BWI76_RS24465 at 5103.013 kb on + strand, within BWI76_RS24465 at 5103.021 kb on - strand, within BWI76_RS24465 at 5103.264 kb on - strand, within BWI76_RS24465 at 5103.303 kb on - strand, within BWI76_RS24465 at 5103.347 kb on + strand, within BWI76_RS24465 at 5103.365 kb on - strand, within BWI76_RS24465 at 5103.370 kb on + strand, within BWI76_RS24465 at 5103.370 kb on + strand, within BWI76_RS24465 at 5103.378 kb on - strand, within BWI76_RS24465 at 5103.378 kb on - strand, within BWI76_RS24465 at 5103.395 kb on + strand, within BWI76_RS24465 at 5103.446 kb on - strand at 5103.446 kb on - strand at 5103.459 kb on + strand at 5103.481 kb on + strand at 5103.486 kb on + strand at 5103.486 kb on + strand at 5103.489 kb on - strand at 5103.489 kb on - strand at 5103.527 kb on + strand at 5103.548 kb on + strand at 5103.556 kb on - strand at 5103.653 kb on + strand at 5103.783 kb on + strand at 5103.840 kb on + strand, within BWI76_RS24470 at 5103.847 kb on + strand, within BWI76_RS24470 at 5103.865 kb on - strand, within BWI76_RS24470 at 5103.920 kb on + strand, within BWI76_RS24470 at 5103.981 kb on - strand, within BWI76_RS24470 at 5103.986 kb on - strand, within BWI76_RS24470 at 5103.986 kb on - strand, within BWI76_RS24470 at 5104.017 kb on - strand, within BWI76_RS24470 at 5104.433 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X remove 5,102,925 + BWI76_RS24465 0.53 +0.5 5,102,996 - BWI76_RS24465 0.59 -0.1 5,103,013 + BWI76_RS24465 0.60 -0.2 5,103,021 - BWI76_RS24465 0.61 +1.2 5,103,264 - BWI76_RS24465 0.79 -0.3 5,103,303 - BWI76_RS24465 0.82 +0.0 5,103,347 + BWI76_RS24465 0.86 -0.3 5,103,365 - BWI76_RS24465 0.87 +0.2 5,103,370 + BWI76_RS24465 0.87 -1.4 5,103,370 + BWI76_RS24465 0.87 -0.5 5,103,378 - BWI76_RS24465 0.88 -0.5 5,103,378 - BWI76_RS24465 0.88 +1.1 5,103,395 + BWI76_RS24465 0.89 +0.4 5,103,446 - +0.3 5,103,446 - +0.6 5,103,459 + +0.7 5,103,481 + -0.2 5,103,486 + +0.1 5,103,486 + -0.8 5,103,489 - +0.0 5,103,489 - +1.1 5,103,527 + -0.9 5,103,548 + +0.7 5,103,556 - +0.6 5,103,653 + +0.1 5,103,783 + -0.1 5,103,840 + BWI76_RS24470 0.15 -1.3 5,103,847 + BWI76_RS24470 0.16 -1.5 5,103,865 - BWI76_RS24470 0.19 -1.2 5,103,920 + BWI76_RS24470 0.28 -1.9 5,103,981 - BWI76_RS24470 0.38 -1.5 5,103,986 - BWI76_RS24470 0.38 -1.1 5,103,986 - BWI76_RS24470 0.38 -3.1 5,104,017 - BWI76_RS24470 0.43 -0.2 5,104,433 + -1.4
Or see this region's nucleotide sequence