Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21940
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X |
---|---|---|---|---|---|
remove | |||||
4,582,771 | - | BWI76_RS21935 | 0.39 | -0.4 | |
4,582,831 | + | BWI76_RS21935 | 0.44 | +1.2 | |
4,582,831 | + | BWI76_RS21935 | 0.44 | -1.2 | |
4,582,986 | - | BWI76_RS21935 | 0.57 | -0.5 | |
4,583,084 | + | BWI76_RS21935 | 0.65 | -0.2 | |
4,583,227 | + | BWI76_RS21935 | 0.77 | +0.6 | |
4,583,323 | - | BWI76_RS21935 | 0.85 | -0.5 | |
4,583,323 | - | BWI76_RS21935 | 0.85 | -0.2 | |
4,583,652 | + | +1.9 | |||
4,583,857 | - | BWI76_RS21940 | 0.37 | +0.5 | |
4,583,974 | - | BWI76_RS21940 | 0.52 | +0.4 | |
4,584,116 | - | BWI76_RS21940 | 0.71 | +0.4 | |
4,584,350 | + | -2.0 | |||
4,584,376 | + | -0.6 | |||
4,584,386 | + | +1.2 | |||
4,584,389 | - | +0.1 | |||
4,584,394 | - | +0.2 | |||
4,584,394 | - | +0.1 | |||
4,584,614 | + | BWI76_RS21945 | 0.14 | +0.1 | |
4,584,730 | + | +0.3 | |||
4,584,738 | - | BWI76_RS21945 | 0.27 | -0.5 | |
4,585,201 | - | BWI76_RS21945 | 0.77 | +0.8 | |
4,585,327 | + | -1.1 |
Or see this region's nucleotide sequence