Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21105 and BWI76_RS21110 are separated by 0 nucleotides BWI76_RS21110 and BWI76_RS21115 are separated by 208 nucleotides
BWI76_RS21105: BWI76_RS21105 - penicillin-binding protein 1C, at 4,415,681 to 4,418,005
_RS21105
BWI76_RS21110: BWI76_RS21110 - hypothetical protein, at 4,418,006 to 4,422,952
_RS21110
BWI76_RS21115: BWI76_RS21115 - 3-mercaptopyruvate sulfurtransferase, at 4,423,161 to 4,424,006
_RS21115
Position (kb) 4418
4419
4420
4421
4422
4423 Strain fitness (log2 ratio) -1
0
1 at 4417.347 kb on - strand, within BWI76_RS21105 at 4417.859 kb on - strand at 4418.403 kb on - strand at 4418.587 kb on - strand, within BWI76_RS21110 at 4418.675 kb on - strand, within BWI76_RS21110 at 4418.802 kb on + strand, within BWI76_RS21110 at 4418.970 kb on + strand, within BWI76_RS21110 at 4419.056 kb on + strand, within BWI76_RS21110 at 4419.069 kb on - strand, within BWI76_RS21110 at 4419.156 kb on + strand at 4419.164 kb on - strand, within BWI76_RS21110 at 4419.215 kb on - strand, within BWI76_RS21110 at 4419.277 kb on + strand, within BWI76_RS21110 at 4419.407 kb on + strand, within BWI76_RS21110 at 4419.546 kb on + strand, within BWI76_RS21110 at 4419.671 kb on + strand, within BWI76_RS21110 at 4419.799 kb on - strand, within BWI76_RS21110 at 4419.804 kb on - strand, within BWI76_RS21110 at 4419.962 kb on - strand, within BWI76_RS21110 at 4419.962 kb on - strand, within BWI76_RS21110 at 4420.272 kb on + strand, within BWI76_RS21110 at 4420.473 kb on + strand, within BWI76_RS21110 at 4420.492 kb on + strand, within BWI76_RS21110 at 4420.757 kb on - strand, within BWI76_RS21110 at 4420.764 kb on + strand, within BWI76_RS21110 at 4421.301 kb on - strand, within BWI76_RS21110 at 4421.428 kb on + strand, within BWI76_RS21110 at 4421.428 kb on + strand, within BWI76_RS21110 at 4421.436 kb on - strand, within BWI76_RS21110 at 4421.689 kb on + strand, within BWI76_RS21110 at 4421.752 kb on + strand, within BWI76_RS21110 at 4422.066 kb on + strand, within BWI76_RS21110 at 4422.107 kb on - strand, within BWI76_RS21110 at 4422.109 kb on - strand, within BWI76_RS21110 at 4422.255 kb on + strand, within BWI76_RS21110 at 4422.492 kb on - strand at 4422.517 kb on - strand at 4422.519 kb on + strand at 4422.606 kb on - strand at 4422.653 kb on + strand at 4422.894 kb on + strand at 4423.226 kb on + strand at 4423.482 kb on - strand, within BWI76_RS21115 at 4423.578 kb on - strand, within BWI76_RS21115 at 4423.745 kb on + strand, within BWI76_RS21115
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X remove 4,417,347 - BWI76_RS21105 0.72 +1.1 4,417,859 - +0.8 4,418,403 - +0.9 4,418,587 - BWI76_RS21110 0.12 +0.8 4,418,675 - BWI76_RS21110 0.14 +0.9 4,418,802 + BWI76_RS21110 0.16 +0.6 4,418,970 + BWI76_RS21110 0.19 +1.3 4,419,056 + BWI76_RS21110 0.21 +0.6 4,419,069 - BWI76_RS21110 0.21 +0.7 4,419,156 + +0.9 4,419,164 - BWI76_RS21110 0.23 +1.2 4,419,215 - BWI76_RS21110 0.24 +0.5 4,419,277 + BWI76_RS21110 0.26 +0.3 4,419,407 + BWI76_RS21110 0.28 +1.3 4,419,546 + BWI76_RS21110 0.31 -1.5 4,419,671 + BWI76_RS21110 0.34 +0.3 4,419,799 - BWI76_RS21110 0.36 +0.7 4,419,804 - BWI76_RS21110 0.36 +0.9 4,419,962 - BWI76_RS21110 0.40 +1.1 4,419,962 - BWI76_RS21110 0.40 +1.1 4,420,272 + BWI76_RS21110 0.46 +0.1 4,420,473 + BWI76_RS21110 0.50 +0.0 4,420,492 + BWI76_RS21110 0.50 +0.7 4,420,757 - BWI76_RS21110 0.56 +0.8 4,420,764 + BWI76_RS21110 0.56 +0.9 4,421,301 - BWI76_RS21110 0.67 +1.1 4,421,428 + BWI76_RS21110 0.69 +1.0 4,421,428 + BWI76_RS21110 0.69 -0.0 4,421,436 - BWI76_RS21110 0.69 +1.3 4,421,689 + BWI76_RS21110 0.74 +0.1 4,421,752 + BWI76_RS21110 0.76 +1.4 4,422,066 + BWI76_RS21110 0.82 +0.7 4,422,107 - BWI76_RS21110 0.83 +0.4 4,422,109 - BWI76_RS21110 0.83 +0.9 4,422,255 + BWI76_RS21110 0.86 +0.0 4,422,492 - +1.1 4,422,517 - +1.3 4,422,519 + -0.1 4,422,606 - +1.2 4,422,653 + +0.8 4,422,894 + -0.5 4,423,226 + -0.3 4,423,482 - BWI76_RS21115 0.38 +0.0 4,423,578 - BWI76_RS21115 0.49 +0.4 4,423,745 + BWI76_RS21115 0.69 +0.4
Or see this region's nucleotide sequence