Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17890
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X |
---|---|---|---|---|---|
remove | |||||
3,720,615 | + | BWI76_RS17885 | 0.67 | -0.1 | |
3,720,786 | + | BWI76_RS17885 | 0.78 | -0.3 | |
3,721,179 | - | +0.0 | |||
3,721,263 | + | -0.1 | |||
3,721,276 | + | -0.0 | |||
3,721,282 | + | -0.1 | |||
3,721,375 | - | +0.0 | |||
3,721,460 | - | -0.1 | |||
3,721,487 | + | -0.6 | |||
3,721,535 | + | -0.5 | |||
3,721,543 | - | -0.6 | |||
3,721,543 | - | -0.2 | |||
3,721,571 | + | -2.4 | |||
3,721,700 | + | BWI76_RS17890 | 0.12 | +1.9 | |
3,721,880 | + | BWI76_RS17890 | 0.31 | +0.5 | |
3,722,048 | + | BWI76_RS17890 | 0.48 | -0.0 | |
3,722,346 | - | BWI76_RS17890 | 0.79 | -0.0 | |
3,722,471 | + | +0.4 | |||
3,722,471 | + | -0.2 | |||
3,722,477 | + | +0.6 | |||
3,722,479 | - | +1.1 | |||
3,722,640 | + | +0.0 | |||
3,722,711 | + | BWI76_RS17895 | 0.13 | -0.0 | |
3,722,719 | - | BWI76_RS17895 | 0.14 | -0.5 | |
3,722,862 | - | BWI76_RS17895 | 0.32 | -0.0 | |
3,723,115 | - | BWI76_RS17895 | 0.63 | -2.8 | |
3,723,125 | - | +1.5 | |||
3,723,311 | - | BWI76_RS17895 | 0.88 | -0.3 | |
3,723,339 | + | -0.6 | |||
3,723,358 | + | +2.7 | |||
3,723,405 | - | -0.3 | |||
3,723,491 | + | +0.6 | |||
3,723,501 | + | +0.5 | |||
3,723,542 | - | BWI76_RS17900 | 0.14 | -1.7 |
Or see this region's nucleotide sequence