Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16840
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X |
---|---|---|---|---|---|
remove | |||||
3,491,591 | + | BWI76_RS16835 | 0.63 | -0.9 | |
3,491,597 | - | BWI76_RS16835 | 0.64 | +0.3 | |
3,491,789 | + | BWI76_RS16835 | 0.73 | +0.5 | |
3,491,808 | + | BWI76_RS16835 | 0.73 | -0.8 | |
3,491,847 | + | BWI76_RS16835 | 0.75 | +0.5 | |
3,491,871 | + | BWI76_RS16835 | 0.76 | -0.0 | |
3,492,086 | + | BWI76_RS16835 | 0.86 | +0.0 | |
3,492,127 | - | BWI76_RS16835 | 0.88 | -0.4 | |
3,492,297 | - | +1.6 | |||
3,492,470 | + | +0.7 | |||
3,492,531 | + | -1.0 | |||
3,492,735 | - | BWI76_RS16840 | 0.20 | -0.8 | |
3,492,765 | + | BWI76_RS16840 | 0.24 | -0.6 | |
3,493,165 | - | BWI76_RS16840 | 0.75 | -1.8 | |
3,493,403 | + | +1.1 | |||
3,493,432 | - | -0.3 | |||
3,493,441 | + | -0.4 | |||
3,493,480 | + | BWI76_RS16845 | 0.12 | -0.1 | |
3,493,493 | - | BWI76_RS16845 | 0.14 | -1.2 | |
3,493,651 | - | BWI76_RS16845 | 0.30 | -0.3 | |
3,493,715 | - | BWI76_RS16845 | 0.36 | +0.1 | |
3,493,903 | - | BWI76_RS16845 | 0.55 | -0.3 | |
3,493,919 | + | BWI76_RS16845 | 0.57 | -0.0 | |
3,494,251 | + | BWI76_RS16845 | 0.90 | +1.3 |
Or see this region's nucleotide sequence