Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16315
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X |
---|---|---|---|---|---|
remove | |||||
3,386,295 | - | BWI76_RS16310 | 0.19 | +0.4 | |
3,386,333 | - | BWI76_RS16310 | 0.22 | -0.3 | |
3,386,414 | - | BWI76_RS16310 | 0.29 | -1.8 | |
3,386,562 | - | BWI76_RS16310 | 0.41 | -1.5 | |
3,387,081 | + | BWI76_RS16310 | 0.84 | -0.2 | |
3,387,098 | + | BWI76_RS16310 | 0.85 | +0.9 | |
3,387,098 | + | BWI76_RS16310 | 0.85 | -1.1 | |
3,387,143 | + | BWI76_RS16310 | 0.89 | +0.4 | |
3,387,445 | + | BWI76_RS16315 | 0.74 | -1.3 | |
3,387,455 | + | BWI76_RS16315 | 0.78 | -0.3 | |
3,388,085 | - | BWI76_RS16320 | 0.62 | -0.4 | |
3,388,101 | - | BWI76_RS16320 | 0.64 | +0.9 | |
3,388,101 | - | -0.3 | |||
3,388,136 | + | BWI76_RS16320 | 0.68 | -0.3 | |
3,388,187 | - | BWI76_RS16320 | 0.74 | -0.6 | |
3,388,187 | - | BWI76_RS16320 | 0.74 | -0.1 | |
3,388,187 | - | BWI76_RS16320 | 0.74 | -0.5 | |
3,388,219 | + | BWI76_RS16320 | 0.78 | -0.7 | |
3,388,314 | - | BWI76_RS16320 | 0.90 | +0.1 | |
3,388,500 | + | +1.3 |
Or see this region's nucleotide sequence