Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12600
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X |
---|---|---|---|---|---|
remove | |||||
2,628,400 | - | BWI76_RS12590 | 0.38 | +0.3 | |
2,628,416 | - | BWI76_RS12590 | 0.40 | -0.9 | |
2,628,484 | - | BWI76_RS12590 | 0.49 | -0.4 | |
2,628,771 | - | BWI76_RS12590 | 0.88 | -0.2 | |
2,628,771 | - | BWI76_RS12590 | 0.88 | -0.9 | |
2,629,141 | - | BWI76_RS12595 | 0.54 | -0.4 | |
2,629,198 | + | BWI76_RS12595 | 0.71 | -1.4 | |
2,629,230 | - | BWI76_RS12595 | 0.80 | -0.7 | |
2,629,282 | - | +1.2 | |||
2,629,372 | + | -0.4 | |||
2,629,380 | - | +0.4 | |||
2,629,819 | - | BWI76_RS12600 | 0.39 | +0.4 | |
2,629,864 | - | BWI76_RS12600 | 0.43 | +1.7 | |
2,629,927 | + | BWI76_RS12600 | 0.49 | +0.1 | |
2,630,077 | - | BWI76_RS12600 | 0.62 | +0.2 | |
2,630,215 | + | BWI76_RS12600 | 0.74 | +0.4 | |
2,630,361 | + | BWI76_RS12600 | 0.87 | +0.8 | |
2,630,394 | + | -0.2 | |||
2,630,402 | - | +0.1 | |||
2,630,553 | + | -0.4 | |||
2,630,689 | + | -0.0 | |||
2,630,763 | + | +0.3 | |||
2,630,883 | - | BWI76_RS12605 | 0.16 | +0.2 | |
2,631,151 | + | BWI76_RS12605 | 0.40 | +1.4 | |
2,631,177 | + | BWI76_RS12605 | 0.42 | -0.9 |
Or see this region's nucleotide sequence