Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05870
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X |
---|---|---|---|---|---|
remove | |||||
1,232,639 | + | BWI76_RS05865 | 0.37 | -0.4 | |
1,232,655 | + | BWI76_RS05865 | 0.38 | +1.2 | |
1,232,785 | - | BWI76_RS05865 | 0.46 | +1.0 | |
1,232,964 | + | BWI76_RS05865 | 0.57 | +1.4 | |
1,233,062 | - | BWI76_RS05865 | 0.64 | +0.0 | |
1,233,101 | - | BWI76_RS05865 | 0.66 | -0.3 | |
1,233,143 | + | BWI76_RS05865 | 0.69 | -0.1 | |
1,233,417 | + | BWI76_RS05865 | 0.86 | -0.0 | |
1,233,562 | + | -0.6 | |||
1,233,574 | + | +0.9 | |||
1,233,575 | - | -0.0 | |||
1,233,624 | + | -0.8 | |||
1,233,624 | + | -0.1 | |||
1,233,642 | - | -0.6 | |||
1,233,680 | + | -0.0 | |||
1,233,707 | + | BWI76_RS05870 | 0.11 | -1.6 | |
1,233,760 | + | BWI76_RS05870 | 0.18 | -0.2 | |
1,234,282 | + | BWI76_RS05870 | 0.88 | -0.5 | |
1,234,295 | - | BWI76_RS05870 | 0.90 | -1.7 | |
1,234,458 | + | -0.1 | |||
1,234,493 | + | -0.2 | |||
1,234,530 | + | -0.1 | |||
1,234,586 | - | BWI76_RS05875 | 0.11 | +0.5 | |
1,234,795 | + | BWI76_RS05875 | 0.22 | -0.3 | |
1,234,976 | + | BWI76_RS05875 | 0.33 | +0.2 | |
1,234,981 | - | BWI76_RS05875 | 0.33 | +0.0 | |
1,235,194 | - | BWI76_RS05875 | 0.45 | -0.0 | |
1,235,320 | + | BWI76_RS05875 | 0.52 | -0.8 |
Or see this region's nucleotide sequence