Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26400

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26390 and BWI76_RS26395 overlap by 8 nucleotidesBWI76_RS26395 and BWI76_RS26400 are separated by 2 nucleotidesBWI76_RS26400 and BWI76_RS26405 are separated by 192 nucleotidesBWI76_RS26405 and BWI76_RS26410 overlap by 11 nucleotides BWI76_RS26390: BWI76_RS26390 - cell division protein FtsX, at 5,463,317 to 5,464,375 _RS26390 BWI76_RS26395: BWI76_RS26395 - cell division protein FtsE, at 5,464,368 to 5,465,036 _RS26395 BWI76_RS26400: BWI76_RS26400 - signal recognition particle-docking protein FtsY, at 5,465,039 to 5,466,553 _RS26400 BWI76_RS26405: BWI76_RS26405 - 16S rRNA (guanine(966)-N(2))-methyltransferase, at 5,466,746 to 5,467,342 _RS26405 BWI76_RS26410: BWI76_RS26410 - membrane protein, at 5,467,332 to 5,467,610 _RS26410 Position (kb) 5465 5466 5467Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 5464.056 kb on + strand, within BWI76_RS26390at 5464.491 kb on - strand, within BWI76_RS26395at 5464.491 kb on - strand, within BWI76_RS26395at 5464.767 kb on - strand, within BWI76_RS26395at 5466.588 kb on - strandat 5466.676 kb on + strandat 5466.953 kb on - strand, within BWI76_RS26405at 5467.051 kb on + strand, within BWI76_RS26405at 5467.305 kb on + strandat 5467.437 kb on + strand, within BWI76_RS26410at 5467.473 kb on - strand, within BWI76_RS26410

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Per-strain Table

Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
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5,464,056 + BWI76_RS26390 0.70 -4.1
5,464,491 - BWI76_RS26395 0.18 -5.5
5,464,491 - BWI76_RS26395 0.18 -0.1
5,464,767 - BWI76_RS26395 0.60 -4.4
5,466,588 - -1.3
5,466,676 + -0.4
5,466,953 - BWI76_RS26405 0.35 -0.9
5,467,051 + BWI76_RS26405 0.51 +0.8
5,467,305 + +0.1
5,467,437 + BWI76_RS26410 0.38 +0.2
5,467,473 - BWI76_RS26410 0.51 +0.7

Or see this region's nucleotide sequence