Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16715

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
3,459,771	-				-2.7
3,459,803	-				+0.3
3,459,847	-				-0.3
3,460,060	-				+0.4
3,460,072	+				-2.0
3,460,072	+				-0.2
3,460,072	+				+0.2
3,460,072	+				-1.4
3,460,072	+				+0.3
3,460,072	+				-0.7
3,460,080	-				+0.7
3,460,080	-				+0.5
3,460,080	-				+0.4
3,460,080	-				+0.7
3,460,252	+				-1.6
3,460,258	-				+2.0
3,460,354	+				-0.1
3,460,391	-				-0.2
3,460,416	+				+0.6
3,460,419	+				-1.2
3,460,424	-				-1.0
3,460,424	-				-0.8
3,460,470	-				+0.3
3,460,481	-				-0.2
3,460,520	+		BWI76_RS16710	0.24	-1.5
3,460,528	-				+2.0
3,460,637	-		BWI76_RS16710	0.75	-0.3
3,460,647	+		BWI76_RS16710	0.80	+2.0
3,460,647	+		BWI76_RS16710	0.80	-1.5
3,460,647	+		BWI76_RS16710	0.80	+1.0
3,460,647	+		BWI76_RS16710	0.80	+1.4
3,460,647	+		BWI76_RS16710	0.80	-1.0
3,460,647	+		BWI76_RS16710	0.80	+0.2
3,460,647	+		BWI76_RS16710	0.80	+0.3
3,460,647	+		BWI76_RS16710	0.80	-2.9
3,460,655	-		BWI76_RS16710	0.83	+0.6
3,460,655	-		BWI76_RS16710	0.83	-0.1
3,460,655	-		BWI76_RS16710	0.83	+1.8
3,460,655	-		BWI76_RS16710	0.83	+0.3
3,460,655	-		BWI76_RS16710	0.83	+0.5
3,460,655	-		BWI76_RS16710	0.83	-2.6
3,460,655	-		BWI76_RS16710	0.83	+0.7
3,460,655	-		BWI76_RS16710	0.83	-0.1
3,460,655	-		BWI76_RS16710	0.83	-1.0
3,460,655	-		BWI76_RS16710	0.83	-2.4
3,460,655	-		BWI76_RS16710	0.83	-0.1
3,460,664	-				+2.3
3,460,693	+				-3.0
3,460,698	+				+0.2
3,460,698	+				+0.1
3,460,698	+				-0.4
3,460,698	+				+2.3
3,460,698	+				+0.5
3,460,725	+				-1.5
3,460,728	-				-0.7
3,460,733	-				-3.4
3,460,812	-				-2.7
3,460,813	-				-2.2
3,460,821	-				-1.8
3,460,830	-				-2.8
3,460,831	-				-1.5
3,460,831	-				-2.4
3,460,863	+				-0.5
3,460,871	-		BWI76_RS16715	0.12	-2.9
3,460,871	-		BWI76_RS16715	0.12	-2.5
3,460,871	-		BWI76_RS16715	0.12	-2.6
3,460,881	-		BWI76_RS16715	0.13	-1.2
3,460,920	+				-0.3
3,460,975	-		BWI76_RS16715	0.24	-0.3
3,461,054	-		BWI76_RS16715	0.32	-1.7
3,461,054	-		BWI76_RS16715	0.32	-2.6
3,461,085	+		BWI76_RS16715	0.36	-2.5
3,461,093	-		BWI76_RS16715	0.37	-2.1
3,461,093	-		BWI76_RS16715	0.37	-0.7
3,461,093	-		BWI76_RS16715	0.37	-2.6
3,461,201	-		BWI76_RS16715	0.49	-0.7
3,461,219	+		BWI76_RS16715	0.50	-1.8
3,461,219	+		BWI76_RS16715	0.50	-0.9
3,461,227	-		BWI76_RS16715	0.51	-1.9
3,461,266	+		BWI76_RS16715	0.56	-3.7
3,461,272	+		BWI76_RS16715	0.56	-1.5
3,461,272	+		BWI76_RS16715	0.56	-1.4
3,461,280	-		BWI76_RS16715	0.57	-0.5
3,461,280	-		BWI76_RS16715	0.57	-2.3
3,461,313	-		BWI76_RS16715	0.61	-2.8
3,461,326	-		BWI76_RS16715	0.62	+0.0
3,461,326	-		BWI76_RS16715	0.62	-3.0
3,461,334	+		BWI76_RS16715	0.63	-2.4
3,461,334	+		BWI76_RS16715	0.63	-0.5
3,461,334	+		BWI76_RS16715	0.63	-0.1
3,461,334	+		BWI76_RS16715	0.63	-1.2
3,461,342	-		BWI76_RS16715	0.64	-2.4
3,461,342	-		BWI76_RS16715	0.64	-0.6
3,461,342	-		BWI76_RS16715	0.64	-2.3
3,461,342	-		BWI76_RS16715	0.64	-3.0
3,461,342	-		BWI76_RS16715	0.64	-1.4
3,461,398	-		BWI76_RS16715	0.70	-1.7
3,461,398	-		BWI76_RS16715	0.70	-1.3
3,461,442	+		BWI76_RS16715	0.75	+3.0
3,461,482	-		BWI76_RS16715	0.79	-1.3
3,461,497	-		BWI76_RS16715	0.81	-3.0
3,461,512	-		BWI76_RS16715	0.83	-1.8
3,461,562	-		BWI76_RS16715	0.88	-3.2
3,461,604	-				-2.4
3,461,655	-				-1.6
3,461,655	-				-4.6
3,461,673	-				-3.4
3,461,738	-				-0.1
3,461,868	-				+0.6
3,461,883	+				-1.5
3,461,883	+				-0.0
3,461,883	+				-0.3
3,461,883	+				-0.8
3,461,918	-				-1.8
3,461,923	-				-2.2
3,461,930	+				-0.7
3,462,033	+				+0.2
3,462,083	+				-0.7
3,462,306	-				+0.2
3,462,322	+				-0.3
3,462,498	+				+0.6
3,462,621	+		BWI76_RS16720	0.17	-1.9
3,462,629	-		BWI76_RS16720	0.18	-0.4