Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09535
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X |
---|---|---|---|---|---|
remove | |||||
1,992,983 | + | -1.2 | |||
1,992,983 | - | -0.3 | |||
1,993,013 | + | BWI76_RS09525 | 0.15 | -0.1 | |
1,993,021 | - | BWI76_RS09525 | 0.17 | +0.3 | |
1,993,026 | - | BWI76_RS09525 | 0.18 | +1.2 | |
1,993,155 | + | BWI76_RS09525 | 0.43 | +0.4 | |
1,993,417 | + | -1.7 | |||
1,993,420 | - | -0.1 | |||
1,993,425 | - | -0.2 | |||
1,993,444 | - | +0.4 | |||
1,993,498 | + | +0.1 | |||
1,993,500 | + | -1.5 | |||
1,993,533 | - | +0.7 | |||
1,993,590 | + | +1.2 | |||
1,993,597 | + | +1.4 | |||
1,993,846 | + | BWI76_RS09530 | 0.86 | +0.8 | |
1,993,990 | + | BWI76_RS09535 | 0.12 | -1.9 | |
1,994,103 | - | BWI76_RS09535 | 0.26 | -0.4 | |
1,994,244 | - | BWI76_RS09535 | 0.43 | +1.6 | |
1,994,512 | + | BWI76_RS09535 | 0.75 | -0.7 | |
1,994,582 | + | BWI76_RS09535 | 0.84 | -0.2 | |
1,994,736 | + | +0.2 | |||
1,994,934 | + | BWI76_RS09540 | 0.22 | +0.1 | |
1,995,367 | + | BWI76_RS09540 | 0.64 | -1.0 | |
1,995,592 | - | BWI76_RS09540 | 0.87 | +0.2 |
Or see this region's nucleotide sequence