Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35755

Experiment: P. phyto corn MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto corn MOI 1
3,609,877	-				-0.0
3,609,921	+				+0.3
3,610,104	+		BPHYT_RS35750	0.14	-2.7
3,610,370	-		BPHYT_RS35750	0.85	-1.9
3,610,407	+				-0.4
3,610,455	+				+0.2
3,610,455	+				-1.1
3,610,503	-				+0.4
3,610,535	+				+1.0
3,610,536	-				+0.8
3,610,536	-				-0.2
3,610,536	-				-0.1
3,610,536	-				+0.9
3,610,705	-				+1.2
3,610,718	+				+1.0
3,610,756	-				+0.3
3,611,142	+		BPHYT_RS35755	0.25	+0.3
3,611,142	+		BPHYT_RS35755	0.25	+0.2
3,611,143	-		BPHYT_RS35755	0.25	+0.9
3,611,191	+		BPHYT_RS35755	0.30	-0.4
3,611,192	-		BPHYT_RS35755	0.30	+0.3
3,611,193	+		BPHYT_RS35755	0.30	+1.7
3,611,194	-		BPHYT_RS35755	0.30	-1.4
3,611,194	-		BPHYT_RS35755	0.30	-0.3
3,611,415	+		BPHYT_RS35755	0.51	+0.8
3,611,415	+		BPHYT_RS35755	0.51	-1.4
3,611,438	+		BPHYT_RS35755	0.53	-0.0
3,611,439	-		BPHYT_RS35755	0.54	-1.1
3,611,490	-		BPHYT_RS35755	0.58	+0.4
3,611,602	-		BPHYT_RS35755	0.69	-0.9
3,611,659	-				-1.3
3,611,671	+		BPHYT_RS35755	0.75	-0.4
3,611,672	-		BPHYT_RS35755	0.76	-1.6
3,612,008	+				+0.5
3,612,020	+				+1.0
3,612,062	+				+0.1
3,612,111	+				+1.6
3,612,349	+		BPHYT_RS35760	0.21	+0.7
3,612,349	+		BPHYT_RS35760	0.21	-0.2
3,612,540	+		BPHYT_RS35760	0.40	+0.0
3,612,698	+		BPHYT_RS35760	0.55	+0.2
3,612,771	-		BPHYT_RS35760	0.62	-0.8
3,612,822	+		BPHYT_RS35760	0.67	+0.4
3,612,838	-		BPHYT_RS35760	0.69	+0.3