Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35750

Experiment: P. phyto corn MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto corn MOI 1
3,609,329	+		BPHYT_RS35745	0.29	-0.3
3,609,330	-		BPHYT_RS35745	0.30	-0.4
3,609,353	+		BPHYT_RS35745	0.34	-0.6
3,609,491	+		BPHYT_RS35745	0.63	+0.2
3,609,502	-		BPHYT_RS35745	0.65	-0.8
3,609,502	-		BPHYT_RS35745	0.65	-0.5
3,609,503	+		BPHYT_RS35745	0.65	-0.6
3,609,504	-		BPHYT_RS35745	0.66	-0.9
3,609,571	+		BPHYT_RS35745	0.80	-0.1
3,609,733	+				-1.0
3,609,877	-				-0.0
3,609,921	+				+0.3
3,610,104	+		BPHYT_RS35750	0.14	-2.7
3,610,370	-		BPHYT_RS35750	0.85	-1.9
3,610,407	+				-0.4
3,610,455	+				+0.2
3,610,455	+				-1.1
3,610,503	-				+0.4
3,610,535	+				+1.0
3,610,536	-				+0.8
3,610,536	-				-0.2
3,610,536	-				-0.1
3,610,536	-				+0.9
3,610,705	-				+1.2
3,610,718	+				+1.0
3,610,756	-				+0.3
3,611,142	+		BPHYT_RS35755	0.25	+0.3
3,611,142	+		BPHYT_RS35755	0.25	+0.2
3,611,143	-		BPHYT_RS35755	0.25	+0.9
3,611,191	+		BPHYT_RS35755	0.30	-0.4
3,611,192	-		BPHYT_RS35755	0.30	+0.3
3,611,193	+		BPHYT_RS35755	0.30	+1.7
3,611,194	-		BPHYT_RS35755	0.30	-1.4
3,611,194	-		BPHYT_RS35755	0.30	-0.3
3,611,415	+		BPHYT_RS35755	0.51	+0.8
3,611,415	+		BPHYT_RS35755	0.51	-1.4