Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32235

Experiment: P. phyto corn MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto corn MOI 1
2,799,957	+				-0.1
2,799,958	-				-0.8
2,800,073	-				+0.7
2,800,157	-		BPHYT_RS32230	0.15	-0.3
2,800,157	-		BPHYT_RS32230	0.15	+0.3
2,800,186	+		BPHYT_RS32230	0.18	+0.2
2,800,203	-		BPHYT_RS32230	0.20	-0.4
2,800,479	-		BPHYT_RS32230	0.49	+0.1
2,800,729	-		BPHYT_RS32230	0.76	+0.2
2,800,821	-		BPHYT_RS32230	0.85	-0.6
2,800,905	+				+0.5
2,801,173	+		BPHYT_RS32235	0.18	-0.4
2,801,173	+		BPHYT_RS32235	0.18	-1.1
2,801,321	+		BPHYT_RS32235	0.31	-1.1
2,801,745	-		BPHYT_RS32235	0.66	-0.5
2,801,916	+		BPHYT_RS32235	0.80	-2.9
2,801,966	-		BPHYT_RS32235	0.84	-0.1
2,801,990	+		BPHYT_RS32235	0.86	-1.6
2,802,063	-				-2.1
2,803,089	-		BPHYT_RS32240	0.26	+0.4