Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24320

Experiment: P. phyto corn MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto corn MOI 1
1,021,347	+		BPHYT_RS24315	0.46	+2.4
1,021,357	-		BPHYT_RS24315	0.47	-1.1
1,021,683	+		BPHYT_RS24315	0.81	-1.0
1,021,866	-				+0.0
1,021,866	-				-1.1
1,021,969	-				+1.2
1,021,972	-				-0.3
1,021,972	-				+1.8
1,022,105	+				+2.0
1,022,129	-				+0.6
1,022,150	+				-1.7
1,022,332	-		BPHYT_RS24320	0.33	+1.3
1,022,495	+		BPHYT_RS24320	0.63	+3.0
1,022,495	+		BPHYT_RS24320	0.63	+0.1
1,022,495	+		BPHYT_RS24320	0.63	+1.6
1,022,496	-		BPHYT_RS24320	0.64	+0.3
1,022,496	-		BPHYT_RS24320	0.64	+1.6
1,022,496	-		BPHYT_RS24320	0.64	-0.1
1,022,500	-		BPHYT_RS24320	0.64	+5.5
1,022,500	-		BPHYT_RS24320	0.64	+0.1
1,022,547	+		BPHYT_RS24320	0.73	-0.8
1,022,548	-		BPHYT_RS24320	0.73	+1.3
1,022,601	-		BPHYT_RS24320	0.83	-1.7
1,022,605	-		BPHYT_RS24320	0.84	-0.5
1,022,663	-				+0.2
1,022,692	-				-0.2
1,022,780	+				+0.0
1,022,828	+				+1.0
1,022,892	+		BPHYT_RS24325	0.12	+0.8
1,022,893	-		BPHYT_RS24325	0.12	+0.2
1,022,893	-		BPHYT_RS24325	0.12	-1.6
1,022,925	-		BPHYT_RS24325	0.14	-0.6
1,023,316	+		BPHYT_RS24325	0.35	-0.2
1,023,317	-		BPHYT_RS24325	0.35	+1.4
1,023,608	+		BPHYT_RS24325	0.51	+0.4