Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06475

Experiment: P. phyto corn MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto corn MOI 1
1,472,155	-		BPHYT_RS06465	0.86	-1.3
1,472,155	-		BPHYT_RS06465	0.86	-0.3
1,472,155	-		BPHYT_RS06465	0.86	+0.4
1,472,155	-		BPHYT_RS06465	0.86	-1.5
1,472,155	-		BPHYT_RS06465	0.86	+0.2
1,472,155	-		BPHYT_RS06465	0.86	-1.1
1,472,155	-		BPHYT_RS06465	0.86	-1.8
1,472,155	-		BPHYT_RS06465	0.86	+0.5
1,472,155	-		BPHYT_RS06465	0.86	+0.5
1,472,156	+		BPHYT_RS06465	0.86	-0.2
1,472,156	+		BPHYT_RS06465	0.86	-0.5
1,472,233	-				-0.2
1,472,326	-				-0.6
1,472,326	-				+0.1
1,472,334	-				-1.5
1,472,336	-				-0.6
1,472,336	-				-0.7
1,472,336	-				-0.4
1,472,339	+				+3.4
1,472,339	+				+0.5
1,472,428	-				+0.4
1,472,582	+		BPHYT_RS06470	0.54	+1.2
1,472,583	-		BPHYT_RS06470	0.55	+0.7
1,472,745	+				-0.5
1,472,762	-				-0.2
1,472,837	-				+0.5
1,472,845	+				+0.2
1,472,845	+				+0.2
1,472,845	+				-1.0
1,472,845	+				+0.5
1,472,847	+				-1.0
1,472,847	+				-0.4
1,472,847	+				-0.7
1,472,848	-				+0.8
1,473,044	+				-0.9
1,473,218	-		BPHYT_RS06475	0.38	+1.4
1,474,289	+		BPHYT_RS06480	0.24	-0.3
1,474,295	-		BPHYT_RS06480	0.24	+1.2
1,474,519	+		BPHYT_RS06480	0.33	-1.6
1,474,520	-		BPHYT_RS06480	0.33	+0.5
1,474,520	-		BPHYT_RS06480	0.33	-0.1
1,474,521	+		BPHYT_RS06480	0.33	-0.1
1,474,521	+		BPHYT_RS06480	0.33	+0.2
1,474,521	+		BPHYT_RS06480	0.33	-0.8
1,474,521	+		BPHYT_RS06480	0.33	-0.3